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results of "genotype count" are different - depending on used programs

Status: Open.

#140 In bigdatagenomics/eggo;

· jerryivanhoe opened on Nov 10, 2015

how to set the instance type for master, manager and workers separately ?

Status: Open.

#138 In bigdatagenomics/eggo;

· jerryivanhoe opened on Nov 5, 2015

Remove minCount line from aws.conf

Status: Open.

#137 In bigdatagenomics/eggo;

· laserson opened on Nov 3, 2015

us-east-1b is hardcoded into cloudformation.template

Status: Open.

#135 In bigdatagenomics/eggo;

· laserson opened on Nov 3, 2015

Verify that requested AMIs are consistent with the requested region/AZ

Status: Open.

#134 In bigdatagenomics/eggo;

· laserson opened on Nov 3, 2015

Extract Hive queries into separate reusable files

Status: Open.

#129 In bigdatagenomics/eggo;

· laserson opened on Oct 20, 2015

dnload_raw operation requires the ability to sudo -u hdfs

Status: Open.

#127 In bigdatagenomics/eggo;

· laserson opened on Oct 14, 2015

Platinum Genomes data set

dataset

Status: Open.

#124 In bigdatagenomics/eggo;

· laserson opened on Sep 16, 2015

·  

v0.1

Reduce number of CM/CDH restarts during cluster config

Status: Open.

#123 In bigdatagenomics/eggo;

· laserson opened on Sep 15, 2015

·  

v0.1

ENCODE data set to be hosted in S3 in parquet format

dataset

Status: Open.

#122 In bigdatagenomics/eggo;

· laserson opened on Sep 15, 2015

·  

v0.1

1000 Genomes Phase 3 VCF data set to be hosted in S3 in parquet format

dataset

Status: Open.

#121 In bigdatagenomics/eggo;

· laserson opened on Sep 15, 2015

·  

v0.1

dbSNP VCF data set to be hosted in S3 in parquet format

dataset

Status: Open.

#120 In bigdatagenomics/eggo;

· laserson opened on Sep 15, 2015

·  

v0.1