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@10XGenomics

10x Genomics

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  1. cellranger cellranger Public

    10x Genomics Single Cell Analysis

    Rust 437 101

  2. loupeR loupeR Public

    Convert Seurat objects to 10x Genomics Loupe files.

    R 145 16

  3. spaceranger spaceranger Public

    Rust 16 3

Repositories

Showing 10 of 75 repositories
  • intel-mkl-src Public Forked from rust-math/intel-mkl-src

    Redistribute Intel MKL as a crate

    10XGenomics/intel-mkl-src’s past year of commit activity
    Rust 1 25 0 6 Updated Nov 18, 2025
  • txg-mcp Public
    10XGenomics/txg-mcp’s past year of commit activity
    TypeScript 0 MIT 0 0 3 Updated Nov 18, 2025
  • bamtofastq Public

    Convert 10x BAM files to the original FASTQs compatible with 10x pipelines

    10XGenomics/bamtofastq’s past year of commit activity
    Rust 66 MIT 7 17 8 Updated Nov 17, 2025
  • rules_conda Public

    Bazel rules for creating conda environments

    10XGenomics/rules_conda’s past year of commit activity
    Go 6 MIT 1 3 4 Updated Nov 10, 2025
  • orbit Public

    Rust wrapper for STAR aligner

    10XGenomics/orbit’s past year of commit activity
    C 18 MIT 4 0 5 Updated Nov 10, 2025
  • spatialdata-io Public Forked from scverse/spatialdata-io
    10XGenomics/spatialdata-io’s past year of commit activity
    Python 3 BSD-3-Clause 50 0 0 Updated Nov 4, 2025
  • websummary Public

    Generate an HTML report in Rust

    10XGenomics/websummary’s past year of commit activity
    Rust 5 0 0 2 Updated Nov 4, 2025
  • scan-rs Public

    Single-cell analysis methods in Rust

    10XGenomics/scan-rs’s past year of commit activity
    Rust 27 1 1 1 Updated Nov 3, 2025
  • analysis_guides Public

    10x Genomics analysis guides files

    10XGenomics/analysis_guides’s past year of commit activity
    Jupyter Notebook 22 14 1 0 Updated Oct 24, 2025
  • FIt-SNE Public Forked from KlugerLab/FIt-SNE

    Fast Fourier Transform-accelerated Interpolation-based t-SNE (FIt-SNE)

    10XGenomics/FIt-SNE’s past year of commit activity
    C++ 0 116 0 1 Updated Sep 24, 2025
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