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Normal #2

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a626481
moved response transpose inside the main class .
Nov 1, 2022
2cd75b3
modified: demo/test.cpp
Nov 1, 2022
4705cbe
Done checking
Nov 2, 2022
7917231
Add necessary data.
Nov 2, 2022
d5067a1
delete debug file
Nov 2, 2022
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4 changes: 3 additions & 1 deletion .gitignore
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Original file line number Diff line number Diff line change
@@ -1 +1,3 @@
build
build
demo/test.cpp
debug.log
2,432 changes: 2,432 additions & 0 deletions data/siRNA/Huesken.csv
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139 changes: 139 additions & 0 deletions data/siRNA/e2s/e2s_test_efficiency.csv
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Original file line number Diff line number Diff line change
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139 changes: 139 additions & 0 deletions data/siRNA/e2s/e2s_test_seq.csv
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CGCAGUACUCGGCCAGCGUgg
GAUGAUGUCUGUGUACUCCcg
UUGGAUCACAUAGCAGUGAac
GUGAACAAAUGGAUAAAAGaa
AAAAGAACUUUAGAAAUUGtt
UAAUAUUUGGAUGAUAAAUtc
AUAAAUUCUUGUUGUAAAUgc
GCUGUCAUUAGGUCCCAUAat
AUAUCAUCCCCAACUGGACct
GACCUGCAGAACAUUGUGCtg
CCUGCAGAACAUUGUGCUGga
GUUCAACAAUGGCCGAAACtc
UCUUUUCUCAUAUUCUCGUtt
UGUUGGACUCCAUCGAUUCtg
GACUCCAUCGAUUCUGAAGga
CUUCAAAAGGUGUCCCUUCtg
UUCUGGUCCAAAUAUAACUgc
GGUCCAAAUAUAACUGCAUtc
GAUGUAGCCACCCCGCAUGga
UGUUCUGCAGGACCUCUGCgg
CAGUGGGUCCUCGGGGUUGgg
GGGGUUGGGCUCCAAGAAGag
AGGACUGGCUUCCAGUCCUct
UGUUGGGGUGAUAGACCAUtg
UCUUGUAGAAGCCCUCAUCag
UUGGGCAGGUUCAGCUCGUtt
GAUCCGCAGCUGCGCCGCCga
CGCCUUCUUGCUGCUGCCCtt
UCAUUCACCAGUGCUAUGAgg
AUUACUUGGUCGGUUUUGGtt
UUGAAUGGGUACUCUGCUGga
UCUGAAGGCUCCCUUAUCAta
UAAGCCCUUGCCAAGUCAAta
AUCAACCUGGAUGUUACGGaa
AGCGCCUCCUCCGUGGCGUat
GGAUGUACUCUUUAAUUUUct
CUUGUAUUCUUCUGGUCGGtg
GAAGGACUCAAAUAUAUUGgt
CAAAUAUAUUGGUAAGAUCat
ACUCUAACUUUCCAUACUCcg
UCCGCCUUCAUAUGGUGUUcc
AAAACUUCACUACAAAUUCat
CCUCCCAGGAUCGUAACCUca
CCCAGGAUCGUAACCUCAUgt
UAUUUGGUUCAUUUAGAAGtt
UAGGAUCUGUUUGAUUGUGat
GUUUGAUUGUGAUGGCUGGcc
UCCAGUCCUUGUCCUCCUCta
UCUAAGAUGGACAGGCACAct
GGCACACUGUCCCCGAAGGgt
CCCACGGAGUCCCUUUCUUtc
ACUCCCAGUUCAUGAGGUUca
GACAGCCACGAAACCAAAUgg
GGCCCCAGGGUCGGUGGAGga
AAGCUUCAGUGCCACUGGCca
GGCCAGGGCCCGACCGGCUtc
GUGAGCAGACGGGCCCGAGct
CGGGCCCGAGCUGCAUACUcc
UCGUAGUUCUCCAAGAGCAgg
CUCGUUGAGUGCAGACUCGgg
CCUUGAUGCCAUCGGGUGGgt
CUUCGGCAUUCUUUCUGAAca
GGUCCAUCCGCAGGGGCUCcc
CUUCCAGUUCUCACUGCUGat
CGGAUACUCCGGCGGGAAGct
UUGGUCGGGUAGGAGGAGAgc
UUGUGUUGGAUGACGCCCUtc
UUGAAAUGAUCCGUCAGGCat
CCGUCAGGCAUAUUUUGCCac
UCUUUCCAUCCAGCUCAGGaa
AACCACCGAGUUCCUUCCUtg
CGUUGUCAGCAUUCUUGUUgt
UUGUCAGCAUUCUUGUUGUtc
UCUCCACAUACCGGAUAAGgg
AUUCCUCCUUCAGUCGCUGca
CUUUUCUAUGCCUACUAGCtg
CAAGCAUCUCUUCCUCAUCag
AAAACACCUUUCUCAUAAGgt
UUUCUUUGGAUUCUUGUUAca
AAAGAAUUAUCCGGUGGUCgt
UGGUCGUCUCUUUUCCUUGca
CUAAGACAAACUGAUUGGAct
GGAUGAACAGGAAUAUUUUca
GAGAGUCAAAAGGAUAUCGac
UGUCUACAAUCCACUGUGUaa
UGGCUCCCUCUCCUUUUGUtg
ACUAUCCGCCCGUGAUAAAct
UGGCUCUGCAGCUGCCAAUag
AGUGCUUGCAAUGACAAUAat
AUUGCAGCUGCCCAUUGAUct
AAUAGCCCCUGUGACGGAAct
UGACGGAACUAAUAUUAGGat
UAUUAGGAUGCCAUAUUUUag
UCUAGUUGGUAUCUUCCUCct
UAGUUGGUAUCUUCCUCCUtc
CUAUUUCUCCUCUUAAUUCtg
UAAAAUUCUCAUCUACAAGat
UUCUAUGGCUUGGGCUUCGtt
GAUAGCAGAACUGUGCGGAtc
UUCCCAACUUGUCUACAUUag
UAGGAUGAUAAAUUUUGGUca
CUUCUGGAAGGAAUAGUUCaa
AUCUGGUUCGGCUUUGAUGcc
UGGUUCGGCUUUGAUGCCAgg
ACUUUUCUUUUAAAUUCUCca
UCUUUCGCAGCAUCAACAUta
CCAGCAUAGAAAUGACACUaa
UACUUAUCUUCCCCAGGCUca
UAGAAAUGCACACAUCACCat
UCAACAUUUGGGUGCCAGAtt
GAAUUUCAUUUUAGGAGGUcg
ACCUUCAUAAAGUGUAUCUgg
GGAGGGCCAAUAAUAAGGAct
GGCCAAUAAUAAGGACUUCcc
UGGUCAAAUACUGAGUGGCta
CUGUUGAUGUUGCAGUGAUag
GACCAAGUAUAGUUGAUCUcc
UAUAGUUGAUCUCCAUUCAta
UCAUAAAUGUUAUCUCCUUta
AUCAAGGGUUAUUUCAGCUag
AGCUAGCUCCUUCUGAAUUct
CGAAGCUCUUGCAGGACAAct
GAAUUCUGCCAUUUUGCUAgc
UAUGGCUCUUGGGUCCACCac
GGUCCACAUUCUAUUUUAAgg
GUCUUCGUCAUCUUCUAGAcc
UCUUCGUCAUCUUCUAGACcc
AUUGCGAGGGACUUUUACUcc
GAGGGACUUUUACUCCUUUgc
AGUCUUCCUUCAUCACUCAgt
UCAAGGGACUAUCAAUGUUgg
AAUGUUGGGUUCUCCUAGAag
UUGGGUUCUCCUAGAAGGCtc
UCCUAGAAGGCUCUGGAUGga
GAAUGGUCCUGACAUCAUAca
UCCACGUUGGGGUGAUAGCag
CUAGCGAGAGCUUAUACCUca
AGCGAGAGCUUAUACCUCAgg
GCGAGAGCUUAUACCUCAGgt
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