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Re sub/august updatefig - #30

Merged

smishra3 merged 17 commits into

reSub/August_updatefig

Nov 13, 2025

Commits on Nov 3, 2025
- inside-outside_classification default inputs updated
  mfs4rd
  committed
  a4c3b4b
- documentation update
  mfs4rd
  committed
  cbe3b98
Commits on Nov 4, 2025
- updates to mesh-related dependencies for python 3.11
  mfs4rd
  committed
  2ffc720
- typo fix in colony_mask.pyw
  mfs4rd
  committed
  fa90639
Commits on Nov 6, 2025
- ACM mesh figure code and dependency update
  mfs4rd
  committed
  c341338
- Merge branch 'reSub-v1' into reSub/August_updatefig
  mfs4rd
  authored
  07ae553
- default colony mask output
  mfs4rd
  committed
  73345f3
- README documentation for figure_generation code
  mfs4rd
  committed
  d637859
Commits on Nov 7, 2025
- Update README.md
  
  mfs4rd
  and
  pgarrison
  authored
  affd91f
- Update README.md
  
  mfs4rd
  and
  pgarrison
  authored
  44e74e7
- Update pdm.lock with latest changes from pyproject.toml
  pgarrison
  committed
  40d5e90
- remove pymeshfix import
  
  Filip Sluzewski
  authored and
  mfs4rd
  committed
  7a5eae7
- correct Data ID in nuclei localization
  mfs4rd
  committed
  9702ca4
Commits on Nov 10, 2025
- correcting camera alignment column name
  mfs4rd
  committed
  af2f2d2
- fix column name in feature extraction
  mfs4rd
  committed
  f802b64
- remove absolute path
  mfs4rd
  committed
  7c8cf7d
- README instructions assume user is in root folder of repo
  mfs4rd
  committed
  cbe8372