Masters project

Main repository for my masters project at the University of Sherbrooke. Hierarchical models to predict predation (biomass flows) in complex trophic communities

Steps of the code

1. format_name.R make sure each name are scientific name and not common name

2. format_matrix.R which results in 65 Ecopath networks in on interaction table

3. resolve_taxonomy.R make sur each name are accepted scientific name

4. get_ecopathdb.R get the metadata associated with each Ecopath model Year for Alto Golfo de California was set to 1985

5. environment_traits.R get the environment related data of every Ecopath model

6. species_traits.R get the traits related data of every species