BioNGFF Viewer

Monorepo while testing around

Development

Clone repo and submodules

git clone [email protected]:BioNGFF/biongff-viewer.git
git submodule init
git submodule update

Install dependencies and run development server

pnpm i
pnpm run dev

Pass the resource to load through the URL source parameter e.g.

http://localhost:5173?source=https://haniffa.cog.sanger.ac.uk/breast-cancer/xenium/0.0.1/morphology_mip.zarr

or visualise a standalone label image

http://localhost:5173/?source=https://hindlimb.cog.sanger.ac.uk/datasets/integrated-test/0.0.1/rotated/hindlimb-iss-rotated_90-label.zarr&isLabel=1

Name		Name	Last commit message	Last commit date
Latest commit History 41 Commits
.github		.github
packages		packages
public		public
viewer		viewer
.eslintrc.json		.eslintrc.json
.gcloudignore		.gcloudignore
.gitignore		.gitignore
.gitmodules		.gitmodules
.prettierrc		.prettierrc
.stylelintrc.json		.stylelintrc.json
LICENSE		LICENSE
README.md		README.md
index.html		index.html
package.json		package.json
pnpm-lock.yaml		pnpm-lock.yaml
pnpm-workspace.yaml		pnpm-workspace.yaml
vite.config.js		vite.config.js