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  • FOI

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Achievement: Pull Sharkx2Achievement: YOLO

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Achievement: Pull Sharkx2Achievement: YOLO

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  1. FOI-Bioinformatics/CanSNPer2 FOI-Bioinformatics/CanSNPer2 Public

    CanSNPer2: A toolkit for SNP-typing bacterial genomes.

    Python 5 2

  2. FOI-Bioinformatics/repgenr FOI-Bioinformatics/repgenr Public

    RepGenR (Representative-Genome Repositories) clusters genome sequences based on average nucleotide identity to produce flexible databases

    Python 3 1

  3. FOI-Bioinformatics/CanSNPer2-data FOI-Bioinformatics/CanSNPer2-data Public

    Repository for the CanSNP database contaning the source tree from CanSNPer version 2 and later

  4. FOI-Bioinformatics/preprimer FOI-Bioinformatics/preprimer Public

    Prepare primers from different formats, i.e. schemes for tiled sequencing from varvamp to artic format. Also prepares and aligns primers with mepcr or exonerate.

    Python 1