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This PR addresses #49 and integrates the new mixed_effects_visualization tool into the 5.allosigma_visualisation stage of the pipeline. The tool generates a heatmap and PyMOL session and was designed to facilitate visualisation of mutations annotated as mixed_effects in MAVISp, helping users interpret their allosteric responses more easily.

  • The general README.md of the Allosigma Pipeline was updated
  • A simple readme.txt with requirements and run instructions of mixed_effects_visualization was included.

@elenapapaleo elenapapaleo requested review from drgbea and mattu90 and removed request for mattu90 December 3, 2025 10:57
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