Materials for nf-core preh-hackathon training KEMRI-wellcome Trust Program site
| Date/Time | Topic |
|---|---|
| Mar 03, 4:00pm - 5:00pm | Introduction to nextflow |
| Mar 05, 3:00pm - 4:00pm | Channels and processes |
| Mar 10, 4:00pm - 5:00pm | Workflow and operators |
| Mar 12, 3:00pm - 4:00pm | Reporting and config files |
| Mar 17, 4:00pm - 5:00pm | Worflow caching and checkpointing |
| Mar 19, 3:00pm - 4:00pm | Hands on: A simple nextflow pipeline |
- what a workflow management system is.
- The benefits of using a workflow management system.
- Explain the benefits of using Nextflow as part of your bioinformatics workflow.
- Explain the components of a Nextflow script.
- How to install nextflow
- Run a Nextflow script.
Please have the following software and user accounts ready.
- GitHub Account
- Docker Hub Account
- Visual Studio Code or your favorite code editor.