v3.0.0

What's Changed

• Use the UnitTestDB metadata feature to ease the core model loading by @JAlvarezJarreta in #86
• Set checksum_xref engine to MyISAM by @TamaraNaboulsi in #87
• Annual copyright update 2025 by @vinay-ebi in #89
• BugFix: make PR instead of attempting to do a commit to a protected branch by @JAlvarezJarreta in #90
• Update license information based on pep-0639 by @JAlvarezJarreta in #91
• Fetch LCA in method Taxonomy.last_common_ancestor by @twalsh-ebi in #92
• Update xref tables to fit with new pipeline by @TamaraNaboulsi in #93

Full Changelog: v2.1.3...v3.0.0

v2.1.3

What's Changed

• Add SQLAlchemy version control in CI GitHub workflow by @JAlvarezJarreta in #84
• Script to test ORM vs core + fixes by @MatBarba in #85

Full Changelog: v2.1.2...v2.1.3

v2.1.2

What's Changed

• Remove id key + add actual composite primary_key by @MatBarba in #83

Full Changelog: v2.1.1...v2.1.2

v2.1.1

What's Changed

• Require type hints in all methods and functions by @JAlvarezJarreta in #81
• Cast DOUBLE to NUMBER by @MatBarba in #82

Full Changelog: v2.1.0...v2.1.1

v2.1.0

What's Changed

• Fix core compatibility with SQLalchemy 1.4/2.0 and MySQL by @MatBarba in #80

Full Changelog: v2.0.2...v2.1.0

v2.0.2

What's Changed

• Add sqlite conversion + test core models by @MatBarba in #79

Full Changelog: v2.0.1...v2.0.2

v2.0.1

What's Changed

• Bugfix pyproject.toml and documentation issues by @JAlvarezJarreta in #77
• Bugfix documentation and remove dependency to ensembl-hive by @JAlvarezJarreta in #78

Full Changelog: v2.0.0...v2.0.1

v2.0.0

What's Changed

• Fix SQLalchemy compatibility warnings by @MatBarba in #76
• Remove ensembl.utils and update documentation by @JAlvarezJarreta in #73

Full Changelog: 1.4.2...v2.0.0

1.4.2

What's Changed

• Migrate from Travis to GitLab CI/CD by @JAlvarezJarreta in #51
• Require DIND runners by @JAlvarezJarreta in #52
• Apply black, pylint and mypy suggestions by @JAlvarezJarreta in #53
• Update version by @JAlvarezJarreta in #54
• Porting of current ensembl.genomio pytest fixtures to ensembl-py (redo) by @ens-LCampbell in #56
• Update repository following new features by @JAlvarezJarreta in #57
• Small bug fixes and add missing environment variable $USER by @JAlvarezJarreta in #58
• Use the correct username by @JAlvarezJarreta in #59
• Use MySQL root user to have write access to server by @JAlvarezJarreta in #61
• Move Sphinx to mkdocs for documentation generation by @JAlvarezJarreta in #60
• CI/CD workflow refinement and improvements by @JAlvarezJarreta in #66
• Update python-dotenv requirement from ~=0.19.2 to ~=1.0.1 by @dependabot in #62
• Update mysqlclient requirement from <2.2.0,>=1.4.6 to >=1.4.6,<2.3.0 by @dependabot in #64
• Bump pytest-dependency from 0.5.1 to 0.6.0 by @dependabot in #65
• Merge pytest and coverage by @JAlvarezJarreta in #67
• Bugfix: add alternatives to fixture or raise exception by @JAlvarezJarreta in #68
• Bugfix: search for the right codebase root by @JAlvarezJarreta in #69
• Bugfix: drop src/python from path components by @JAlvarezJarreta in #70
• Grab all submodules, not only init.py by @JAlvarezJarreta in #71
• Update GitLab CI/CD by @JAlvarezJarreta in #72

New Contributors

• @ens-LCampbell made their first contribution in #56
• @dependabot made their first contribution in #62

Full Changelog: 1.3.0...1.4.2

1.3.0

What's Changed

• Annual copyright update 2024 by @marcoooo in #42
• Fix escape char by @MatBarba in #44
• Update where declarative_base is imported from by @MatBarba in #45
• updated case sensitivity in table.sql parsing. by @marcoooo in #43
• Adding xref db models by @TamaraNaboulsi in #46
• Add archive file utils by @JAlvarezJarreta in #48
• Remove tmp_dir fixture as pytest offers tmp_path since v6.2 by @JAlvarezJarreta in #47
• Minor fix by @TamaraNaboulsi in #49

New Contributors

• @TamaraNaboulsi made their first contribution in #46

Full Changelog: 1.2.2...1.3.0