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Can I use wastewater influenza sequnce obtained from Twist Viral pannel?

questionFurther information is requestedFurther information is requested

Status: Open.

#687 In IKIM-Essen/uncovar;

· nitinShukla1912 opened on Feb 4, 2025

Ragtag fails randomly

bugSomething isn't workingSomething isn't working

Status: Open.

#680 In IKIM-Essen/uncovar;

· johanneskoester opened on Nov 7, 2024

keep until https://github.com/bioconda/bioconda-recipes/pull/42192 and we can pin to 4.3.1 above...

Status: Open.

#670 In IKIM-Essen/uncovar;

· github-actions opened on Oct 17, 2024

Add rules for generating report only with qc measures

enhancementNew feature or requestNew feature or request

Status: Open.

#606 In IKIM-Essen/uncovar;

· alethomas opened on Oct 25, 2023

-Oz generates a .vcf.gz!!

todo

Status: Open.

#570 In IKIM-Essen/uncovar;

· github-actions opened on Oct 12, 2022

Remove Masked polished sequence from reporting. RKI Only

enhancementNew feature or requestNew feature or request

invalidThis doesn't seem rightThis doesn't seem right

Status: Open.

#556 In IKIM-Essen/uncovar;

· alethomas opened on Aug 2, 2022

master and dev branch

enhancementNew feature or requestNew feature or request

Status: Open.

#538 In IKIM-Essen/uncovar;

· alethomas opened on May 11, 2022

Add a first init rule

enhancementNew feature or requestNew feature or request

Status: Open.

#537 In IKIM-Essen/uncovar;

· alethomas opened on May 10, 2022

Include coverage plots in wastewater report

bugSomething isn't workingSomething isn't working

Status: Open.

#518 In IKIM-Essen/uncovar;

· thomasbtf opened on Mar 28, 2022

Add csv table in report of all kallisto calls

enhancementNew feature or requestNew feature or request

Status: Open.

#517 In IKIM-Essen/uncovar;

· thomasbtf opened on Mar 28, 2022

generate report without found species diversity

enhancementNew feature or requestNew feature or request

Status: Open.

#514 In IKIM-Essen/uncovar;

· alethomas opened on Mar 24, 2022

automatically generate folders for data handling

enhancementNew feature or requestNew feature or request

Status: Open.

#509 In IKIM-Essen/uncovar;

· alethomas opened on Mar 23, 2022