Atof testing #490
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Atof testing #490
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…od to chose the threshold for matching
…s were no tracks were matched by assigning a straight track
…rack, track projection indices in the out banks
…ub.com/JeffersonLab/coatjava into 481-make-atof-clustering-more-flexible
…ub.com/JeffersonLab/coatjava into 481-make-atof-clustering-more-flexible
* DC v2: includes TFLight fix and new dc beta time walk with constants from /calibration/dc/v2 (#494) * fix issue for path length in FD tracking * fix issue for coordinate transformation from global to tilted sector coordinate * add comments to explain transition of starting point for path length * T2D with beta dependence. Fixes in interpolation. * Fix for instances where the t2d function turns over. * Fix in last interpolation step. More validation plots. * Fix table filling * B-field interpolation test interpolation in B instead of B^2. More plots * Added modularity for calibration use * version bump * switch to use new dc/v2 tables * switch to use new dc/v2 for ref_pressure too --------- Co-authored-by: tongtongcao <[email protected]> Co-authored-by: ziegler <ziegler@enpziegler-mac> * Update DC reconstruction at the denoisinng level (#499) * cancel SNR and change limit of total DC hits from raw hits to hits after denoising * remove unused codes * reset limit for prob in DC clustering and cancel requirement that no skipped layer for cluster candidates from splitter (#500) * pass 2 additional values * fix data type * feat: pre-commit hook to update banks README (#505) * Change the option to select the track finding to a enum. Now this option can be setup from the yaml file with the option Mode: ``` ALERT: Mode: "AI_Track_Finding" ``` Add a cut on the number of hits to rely on the conventional track finding with there is more than 300 hits. * Change the default options for DJL: - Use a single thread for the inference. - Remove waring about the graph executor optimization * Modification of the track candidates generation * Improve the function to get all the track candidates. * Update AHDCEngine to initialize model conditionally and adjust prediction threshold * New features for ALERT Kalman filter+optimized parameters (#445) * Optimization of Kalman Filter: * adjusted number of filtering iterations from 10 to 5; * adjusted step size dx for calculation of ddoca/dx from 10^8 to 10^5; * Added AHDC hits residuals (post-fit and pre-fit) in the output: * residuals in the AHDC::Hits list in the alert.json file; * filling the hits residuals in the RecoBankWriter; * added residual and residual_prefit in ahdc/Hit/Hit.java * added a identification flag to match ahdc/KalmanFilter/Hit.java to ahdc/Hit/Hit.java * Successfully affected the calculated hit residual to the correct AHDC::Hit. * Fixed and improved the calculation of the post-fit residuals: * affecting the track parameters to the KFTrack right after the fit; * redo a forward indicators pass without correction; * * Cleaning the Kalman filter code: - removed all "cylindrical coordinates" vector and measurement functions; - renamed all preexisting vector and measurement function with their original name. - removed many commented printouts. * Attempt to include hit "sign" / left-right disambiguation: * added "virtual wires" located at the distance-of-closest-approach of the actual wire, on each side of the wire; * added hit sign parameter in KalmanFilter/Hit class; * added a new distance function to KalmanFilter/Hit class calculate the distance of a point to the correct virtual wire depending on the sign; * attempt to modify the "h" function to call new distance function * Fix of a parameter modified by mistake. * Added a second definition of BackwardIndicators in AHDC/KalmanFilter to be able to initialize a vertex. * Added a flag setDefinedVertex to AHDC/KalmanFilter and KFitter to define "hit_beam" vertex. * Reset Niter and ddoca step size parameters to 10, 1.e-8 respectively. * Added reading of wire ADC from the AHDC HitReader, and functions to access ADC for AHDC/Hit/Hit and AHDC/KalmanFilter/Hit. Added filtering of two hits on same superlayer/layer based on ADC (largest ADC is kept) and use info to determine the hit sign. * Added an option to build the initial track with just the hits combination and preset fixed parameters in AHDCEngine. Added a function in AHDC/KalmanFilter/Hit.java to calculate the measurement vector if we have a sign. * Substituted call of default hit vector and hit measurement functions with hit vector and measurement functions that handle hit left/right disambiguation. * Started to reintroduce the hit sign. * Save state: back to status quo before revising sign. * Added variable measurement error for hits with sign defined, with tracks on the wrong side. * Implemented varaible measurement error for signed hits: * if track on right side of wire, normal error; * if track on wrong side of wire, inflated error; Ensured reordering of hits by increasing phi; added exception for "rollover" around phi = pi; * fixed once and for all the convention for hit sign: sign >0 if phi_expected state > phi_wire * Tried to introduce a "pull" to the track on the correct sign of a wire by setting the measurement on the correct "virtual wire" with a larger error. * Revert "Tried to introduce a "pull" to the track on the correct sign of a wire by setting the measurement on the correct "virtual wire" with a larger error." This reverts commit 9bf4715. * Fixed the convention for the "virtual wires": wire "minus" ("plus") at +deltaphi (-deltaphi) since wire x, y position depend on -R*sin(phi), -R cos(phi) respectively. * Improved the functions to calculate hit vector: returns doca if sign is 0 or if sign is good. * Added a hit distance function with goodsign as input, and H (measurement matrix) function with goodsign as an input. * Added (commented) calls of functions with sign. * Added a simple handle to disable reading of MC variables. * Rerolled to fitting with no double hit. * Harmonized simulation flag: - one simulation flag is declared in AHDCengine and defined as false; - it is now propagated into KalmanFilter. * Added a check to read MC hits in AHDC_engine. --------- Co-authored-by: Mathieu Ouillon <[email protected]> * Petiroc timestamps2 (#512) * Added petiroc board timestamps * Adding CI stuff that is for gitlab modified: common-tools/clas-detector/src/main/java/org/jlab/detector/decode/CLASDecoder4.java modified: common-tools/clas-detector/src/main/java/org/jlab/detector/decode/CodaEventDecoder.java modified: common-tools/clas-detector/src/main/java/org/jlab/detector/decode/DetectorDataDgtz.java modified: etc/bankdefs/hipo4/data.json --------- Co-authored-by: Whitney Armstrong <[email protected]> * bump version * version bump * create a method to decode evio events in a single line to simplify usage in mon12 and ced * new DCRB firmware (#509) * implemented decoding of new DCRB banks with ToT and order labeling of DC hit to use the first in time * removed anused code * printingg exception from DC banks decoding --------- Co-authored-by: Nathan Baltzell <[email protected]> * fix: remove `jdtls` files * fix: ignore `jdtls` files * Use pulse time and hide MVTFitter * Change samplingTime * Fix issue * version bump --------- Co-authored-by: raffaelladevita <[email protected]> Co-authored-by: tongtongcao <[email protected]> Co-authored-by: ziegler <ziegler@enpziegler-mac> Co-authored-by: baltzell <[email protected]> Co-authored-by: Christopher Dilks <[email protected]> Co-authored-by: MathieuOuillon <[email protected]> Co-authored-by: efuchey <[email protected]> Co-authored-by: Mathieu Ouillon <[email protected]> Co-authored-by: Whitney Armstrong <[email protected]> Co-authored-by: Whitney Armstrong <[email protected]> Co-authored-by: Felix Touchte Codjo <[email protected]> Co-authored-by: Nathan Baltzell <[email protected]>
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