Refactor and make HealthLLM.jl more modular and easy to use - #21
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ParamThakkar123 wants to merge 20 commits into
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Refactor and make HealthLLM.jl more modular and easy to use#21ParamThakkar123 wants to merge 20 commits into
ParamThakkar123 wants to merge 20 commits into
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TheCedarPrince
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Mar 20, 2026
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Let's keep the conversation going here.
- Resolved merge conflicts in .gitignore, Project.toml, docs/src/index.md, src/HealthLLM.jl, src/database.jl, src/query.jl, src/utils.jl, test/runtests.jl - Removed src/embedding.jl and src/pgvector.jl (deleted by other branch; functionality inlined into utils.jl and database.jl respectively) - Added missing imports to HealthLLM module - Added docstrings with arguments, returns, and examples to public functions - Updated docs example to show full pipeline
…test/Project.toml
- docs/src/index.md: Full pipeline guide covering file collection, model registration, embedding building/validation/storage, RAG querying, and database query usage - src/utils.jl: Add docstrings to build_index_rag, get_schema, HuggingFaceLoadResult, load_huggingface_model, register_models - test/: Fix UtilsTest, DatabaseTest, QueryTest with proper module imports; remove stale PgvectorTest/EmbeddingTest; add pipeline tests; remove DrWatson dependency; fix test/Project.toml deps - Project.toml: Add DrWatson compat entry for Aqua compliance
Codecov Report❌ Patch coverage is
Additional details and impacted files@@ Coverage Diff @@
## main #21 +/- ##
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+ Coverage 27.27% 60.78% +33.51%
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Files 4 4
Lines 88 102 +14
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+ Hits 24 62 +38
+ Misses 64 40 -24 ☔ View full report in Codecov by Harness. 🚀 New features to boost your workflow:
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TheCedarPrince
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Quick comment @ParamThakkar123 :
Could you give me an executive summary in your own words of what all you did here as well as how I should use this and test it out?
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Sure @TheCedarPrince
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And I have also added a script for you to test the pipeline, you will need ollama and pgvector setup to run the script. the script is present in the root folder as |
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here's a screenshot of llama3.2 run using 
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Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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