Code for the analysis and data visualization found in the paper entitled "Genomic epidemiology of dengue virus 2 and 3 reveals repeated introductions and exportations of several lineages in Colombia."

R. Rivero, V. Tique-Salleg, D. Echeverri-De la Hoz, L. Damodaran, D. Paternina, M. Santos-Vega, D. Torres, D. Davalos, E. López-Medina, M.I. Breban, G. Arrieta, J. Miranda, V. Hill, N.D Grubaugh, and S. Mattar.

If you use this code or any of the findings, please cite our manuscript: medRxiv 2025.08.07.25333238