Catch error in issue #35 where no reference UMIs are produced#38
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aaronsaunders wants to merge 1 commit intoSorenKarst:masterfrom
Open
Catch error in issue #35 where no reference UMIs are produced#38aaronsaunders wants to merge 1 commit intoSorenKarst:masterfrom
aaronsaunders wants to merge 1 commit intoSorenKarst:masterfrom
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Catches the error SorenKarst#35
Owner
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Hi Aaron, This is great! The pipeline needs a lot more checks like this. I will include your pull request in the development version after the next release. Regards |
Author
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I am more than happy to make a contribution. Thanks for the pipeline. |
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I made a simple test to catch the error in issue #35. It counts the sequences in the output of
umi12cf.fa. The script exits if there are zero sequences an gives an error message that suggests what the problem may have been (based on your text in the issue).