GitHub - alaamokbel/MeningealTransciptome: Includes UMAP clustering and labeling of single cell data (R code) - scRNASeq_seurat_code_103122.R · GitHub

Name		Name	Last commit message	Last commit date
Latest commit History 10 Commits
Bulk RNA-seq FASTQ files		Bulk RNA-seq FASTQ files
Monocle3 Code.R		Monocle3 Code.R
UpdatedPipeline.sh		UpdatedPipeline.sh
alignscRNAseq_ShamNEW.slurm		alignscRNAseq_ShamNEW.slurm
alignscRNAseq_TBINEW.slurm		alignscRNAseq_TBINEW.slurm
meninges_bulkRNA_generalRcode_103122.R		meninges_bulkRNA_generalRcode_103122.R
scRNASeq_seurat_code_103122.R		scRNASeq_seurat_code_103122.R
single_cell_DE.R		single_cell_DE.R

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Includes UMAP clustering and labeling of single cell data (R code) - scRNASeq_seurat_code_103122.R

clustering genes rcode sc sham tbi umap

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