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[Community] ARM64/Blackwell Docker Deployment for DGX Spark

enhancementNew feature or requestNew feature or request

Status: Open.

#78 In aqlaboratory/openfold-3;

· adrian-greenneuron opened on Dec 18, 2025

[BUG] Top templates incorrectly filtered out by training preprocessing script

bugSomething isn't workingSomething isn't working

data preprocessingRelating to the preprocessing of queries and datasetsRelating to the preprocessing of queries and datasets

OpenFold Consortium MemberUse this tag if you are a member of the OpenFold Consortium to receive higher priorityUse this tag if you are a member of the OpenFold Consortium to receive higher priority

Status: Open.

#72 In aqlaboratory/openfold-3;

· ECalfeeAdaptive opened on Dec 12, 2025

[BUG] Cuda Out of Memory on large structure even low_mem is set

bugSomething isn't workingSomething isn't working

inferenceRelating to the inference pipelineRelating to the inference pipeline

Status: Open.

#71 In aqlaboratory/openfold-3;

· xraywu opened on Dec 11, 2025

[QUESTION] evoformer_attention

bugSomething isn't workingSomething isn't working

InstallationIssue with installationIssue with installation

Status: Open.

#62 In aqlaboratory/openfold-3;

· kkbiu opened on Nov 30, 2025

Allow to specify the number of the first residue of a chain

contributions welcomeWe welcome community contributions for this topicWe welcome community contributions for this topic

enhancementNew feature or requestNew feature or request

good first issueGood for newcomersGood for newcomers

Status: Open.

#58 In aqlaboratory/openfold-3;

· lucajovine opened on Nov 24, 2025

[QUESTION] A question about antibody-antigen dataset in Figure 1.C

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#56 In aqlaboratory/openfold-3;

· ahmedselim2017 opened on Nov 23, 2025

[BUG] SLURM autodetection causes OF3 to hang on compute cluster

bugSomething isn't workingSomething isn't working

inferenceRelating to the inference pipelineRelating to the inference pipeline

OpenFold Consortium MemberUse this tag if you are a member of the OpenFold Consortium to receive higher priorityUse this tag if you are a member of the OpenFold Consortium to receive higher priority

Status: Open.

#47 In aqlaboratory/openfold-3;

· reedharrison opened on Nov 19, 2025

Ab-Ag Modelling Setup

enhancementNew feature or requestNew feature or request

Status: Open.

#46 In aqlaboratory/openfold-3;

· jstiller-visterra opened on Nov 18, 2025

[BUG] Template alignments skipped after processing.

bugSomething isn't workingSomething isn't working

data preprocessingRelating to the preprocessing of queries and datasetsRelating to the preprocessing of queries and datasets

OpenFold Consortium MemberUse this tag if you are a member of the OpenFold Consortium to receive higher priorityUse this tag if you are a member of the OpenFold Consortium to receive higher priority

Status: Open.

#43 In aqlaboratory/openfold-3;

· halasadi opened on Nov 14, 2025

[BUG][Documentation gap] Template alignments skipped in preprocessing. Request details on input .sto requirements.

bugSomething isn't workingSomething isn't working

data preprocessingRelating to the preprocessing of queries and datasetsRelating to the preprocessing of queries and datasets

documentationImprovements or additions to documentationImprovements or additions to documentation

OpenFold Consortium MemberUse this tag if you are a member of the OpenFold Consortium to receive higher priorityUse this tag if you are a member of the OpenFold Consortium to receive higher priority

trainingRelating to the training pipelineRelating to the training pipeline

Status: Open.

#42 In aqlaboratory/openfold-3;

· ECalfeeAdaptive opened on Nov 14, 2025

Is there a way to provide an installation-default runner_yaml file?

contributions welcomeWe welcome community contributions for this topicWe welcome community contributions for this topic

enhancementNew feature or requestNew feature or request

InstallationIssue with installationIssue with installation

Status: Open.

#40 In aqlaboratory/openfold-3;

· roccomoretti opened on Nov 13, 2025

Always delete <code>raw</code> Colabfold folder before processing

bugSomething isn't workingSomething isn't working

data preprocessingRelating to the preprocessing of queries and datasetsRelating to the preprocessing of queries and datasets

Status: Open.

#39 In aqlaboratory/openfold-3;

· qurat-ul-ain95 opened on Nov 12, 2025