This repository contains parameter files for the Atlantis Model for Puget Sound. The Atlantis Ecosystem Model considers all parts of marine ecosystems – biophysical, economic and social. Atlantis was developed by Dr. Beth Fulton at the Commonwealth Scientific and Industrial Research Organisation (CSIRO). To access Atlantis https://research.csiro.au/atlantis/home/links/
See releases to pull a previous versions. Releases do not include hydrofiles. To pull hydrofiles the first time the repository is pulled, you need to install Git Large File System.
curl -s https://packagecloud.io/install/repositories/github/git-lfs/script.deb.sh | sudo bash
sudo apt-get install git-lfs
git lfs install
git lfs pull
H. Morzaria-Luna, I.C. Kaplan, C.J. Harvey, R. Girardin, E.A. Fulton, P. MacCready, B. Chasco, P. Horne, M. Schmidt. In press. Design and Parameterization of a Spatially Explicit Atlantis Ecosystem Model for Puget Sound. NOAA Technical Memorandum NMFS-NWFSC-177. Northwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration. https://repository.library.noaa.gov/view/noaa/40463