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22 changes: 14 additions & 8 deletions biolink-model.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -1270,7 +1270,7 @@
a biological population (general, study, cohort, etc.) with a specific
set of characteristics to constrain an association.
is_a: qualifier
range: population of individual organisms # TODO: harmonize with 'response target context qualifier'

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temporal context qualifier:
description: >-
Expand Down Expand Up @@ -5486,17 +5486,23 @@
in_subset:
- translator_minimal

original subject:
original subjects:
is_a: association slot
description: >-
used to hold the original subject of a relation (or predicate) that an external knowledge
source uses before transformation to match the biolink-model specification.
used to hold the original subject(s) of a relation (or predicate) that an external knowledge
source uses before transformation to match the biolink-model specification or Translator
node normalization.
multivalued: true
domain: association

original object:
original objects:
is_a: association slot
description: >-
used to hold the original object of a relation (or predicate) that an external knowledge
source uses before transformation to match the biolink-model specification.
used to hold the original object(s) of a relation (or predicate) that an external knowledge
source uses before transformation to match the biolink-model specification or Translator
node normalization.
multivalued: true
domain: association

original predicate:
aliases: ['original relation', 'relation']
Expand Down Expand Up @@ -9248,7 +9254,7 @@
slots:
- clinical trial phase
- clinical trial primary purpose
- creation date # maybe?

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id_prefixes:
- CLINICALTRIALS

Expand Down Expand Up @@ -9630,9 +9636,9 @@
- knowledge level
- agent type
- timepoint
- original subject
- original subjects
- original predicate
- original object
- original objects
# denormalized fields
- subject category
- object category
Expand Down