v0.12.16

What's Changed

• Pin sphinx by @cthoyt in #472
• Add explicit handling of NaNs when loading semantic mappings by @cthoyt in #473
• Upstream ROR implementation by @cthoyt in #471
• Fix CLI typing by @cthoyt in #475
• Externalize ROBOT by @cthoyt in #474
• Add OBO lexical review tool by @cthoyt in #477

Full Changelog: v0.12.15...v0.12.16

v0.12.15

Full Changelog: v0.12.14...v0.12.15

v0.12.14

What's Changed

• Improve MeSH xref processing by @cthoyt in #464
• Update to handle ROR data schema v2 by @cthoyt in #465
• Enable skipping maintainer annotations by @cthoyt in #466

Full Changelog: v0.12.13...v0.12.14

v0.12.13

Full Changelog: v0.12.12...v0.12.13

v0.12.12

What's Changed

• Minor cleanups by @cthoyt in #461

Full Changelog: v0.12.11...v0.12.12

v0.12.11

What's Changed

• Turn off primary identifier resolution in pyobo.get_name() by default by @cthoyt in #440
• Add get_primary_reference by @cthoyt in #439
• Improve documentation for typed dicts by @cthoyt in #441
• Add caching to embedding by @cthoyt in #443
• Update relationship for mentions by @cthoyt in #446
• Consolidate synonym type usage in HGNC and RGD by @cthoyt in #447
• Link to script that produced ontology by @cthoyt in #448
• Complete locus types in HGNC by @cthoyt in #449
• Fix serialization of axioms on relationships in both OBO and OFN by @cthoyt in #453
• Update OBO ontology-level property value serialization by @cthoyt in #452
• Annotate HGNC gene locations with CHR by @cthoyt in #451
• Add GoldBook source by @cthoyt in #436
• Add graph machine learning workflow by @cthoyt in #454
• Update HGNC gene families by @cthoyt in #456
• Add getter for semantic mappings by @cthoyt in #457

Full Changelog: v0.12.10...v0.12.11

v0.12.10

What's Changed

• Support custom grounding workflows by @cthoyt in #438

Full Changelog: v0.12.9...v0.12.10

v0.12.9

What's Changed

• Add SciSpacy integration by @cthoyt in #437

Full Changelog: v0.12.8...v0.12.9

v0.12.8

What's Changed

• Add ICONCLASS source by @cthoyt in #433
• Enable getting text embeddings in bulk for a given ontology by @cthoyt in #434

Full Changelog: v0.12.7...v0.12.8

v0.12.7

What's Changed

• Update IANA media types by @cthoyt in #428
• Handle ontology IRI and ontology version IRI by @cthoyt in #431

Full Changelog: v0.12.6...v0.12.7