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@biosustain

DTU Biosustain

The Novo Nordisk Foundation Center for Biosustainability

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  1. guidelines guidelines Public

    Guidelines for employees and collaborators at BRIGHT, with the goal of educating readers and minimizing the likelihood of issues arising with our computational platforms.

    4

  2. potion potion Public archive

    Flask-Potion is a RESTful API framework for Flask and SQLAlchemy, Peewee or MongoEngine

    Python 489 49

  3. cameo cameo Public

    cameo - computer aided metabolic engineering & optimization

    Python 123 45

  4. shu shu Public

    Multi-dimensional, trans-omics metabolic maps.

    Rust 54 1

  5. croissance croissance Public

    Tool for estimating growth rates from microbial growth curves

    Python 32 12

  6. Maud Maud Public

    Enzyme models that take into account kinetics, allostery and thermodynamics

    Python 29 2

Repositories

Showing 10 of 163 repositories
  • cobradb Public
    biosustain/cobradb’s past year of commit activity
    Python 0 0 0 0 Updated Apr 15, 2026
  • dsp_metagenomics_training Public

    Introduction course to metagenomics data analysis

    biosustain/dsp_metagenomics_training’s past year of commit activity
    HTML 3 GPL-3.0 2 0 0 Updated Apr 15, 2026
  • dsp_notes Public

    Public notes and hints of the Data Science Platform.

    biosustain/dsp_notes’s past year of commit activity
    Python 1 1 0 5 Updated Apr 14, 2026
  • dsp_course_metabolomics_intro Public

    About Introduction to massspectrometry-based metabolomics (raw data processsing and downstream analysis).

    biosustain/dsp_course_metabolomics_intro’s past year of commit activity
    Python 0 0 0 0 Updated Apr 14, 2026
  • quantms-containers Public Forked from bigbio/quantms-containers

    DIANN docker container and OpenMS release for quantms

    biosustain/quantms-containers’s past year of commit activity
    Dockerfile 0 Apache-2.0 5 0 1 Updated Apr 10, 2026
  • lifelike Public

    Turning big data into contextualized knowledge. Lifelike is a modern application platform for data extraction, analysis and visualization.

    biosustain/lifelike’s past year of commit activity
    Python 1 1 0 0 Updated Apr 8, 2026
  • growthcurves_app Public

    Growth Curve apps for Plate Reader and Pio Reactor experiments using the growthcurves Python Package

    biosustain/growthcurves_app’s past year of commit activity
    Python 0 GPL-3.0 0 2 1 Updated Apr 8, 2026
  • pankb Public

    The Pangenome Knowledge Base (PanKB) serves as an up-to-date resource for pangenomics research methods and the dissemination of results and currently offers basic pangenome characteristics and advanced pangenome analytics for 8 major biotech bacteria families.

    biosustain/pankb’s past year of commit activity
    HTML 5 MIT 1 0 0 Updated Apr 7, 2026
  • PioGrowth Public

    App for analysis of optical density measurements produced mainly with a PioReactors, see https://pioreactor.com/

    biosustain/PioGrowth’s past year of commit activity
    Python 1 MIT 0 2 0 Updated Mar 31, 2026
  • dsp_course_proteomics_intro Public

    Introduction to massspectrometry-based proteomics.

    biosustain/dsp_course_proteomics_intro’s past year of commit activity
    Jupyter Notebook 1 3 2 1 Updated Mar 31, 2026

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