v1.0.0

Release of Himito v1.0.0. Supporting lrWGS only. Later version with srWGS as optional input will come soon.

What's Changed

• Hs add af by @hangsuUNC in #1
• add docker and wdl files by @hangsuUNC in #2
• Hs dp issue by @hangsuUNC in #4
• added method to assemble major haplotype by @hangsuUNC in #5
• remove required parameter by @hangsuUNC in #6
• replace parameter name by @hangsuUNC in #7
• change genotype of output vcf by @hangsuUNC in #8
• change genotype and sample name by @hangsuUNC in #9
• Phasing by @hangsuUNC in #10
• Hs methylatoin by @hangsuUNC in #12
• Hs methylatoin by @hangsuUNC in #13
• debug asm.rs, exclude edges linked to SINK by @hangsuUNC in #14
• Hs annotate methylation by @hangsuUNC in #15
• Hs filter methylation by @hangsuUNC in #16

Full Changelog: https://github.com/broadinstitute/Himito/commits/alpha

What's Changed

• Hs sr correct by @hangsuUNC in #17
• Hs minor haplotype by @hangsuUNC in #18
• added ont parameters by @hangsuUNC in #19
• added quick-start by @hangsuUNC in #20
• Hs refend by @hangsuUNC in #21
• added NUMTs breakends caller by @hangsuUNC in #22

Full Changelog: alpha...v.1