Skip to content

Conversation

shadizaheri
Copy link
Collaborator

  • Created NormalizeVCF.wdl to automate the process of normalizing VCF files.
  • The workflow removes problematic INFO fields (HAPCOMP and HAPDOM) and normalizes the VCF.
  • Included tasks for removing HAPCOMP, removing HAPDOM, and normalizing VCF using bcftools.
  • Outputs the normalized VCF to be used in Terra data tables.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant