Metabolic Simulation Framework

This project simulates simplified metabolic networks using modular, human-readable definitions.

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🚀 Building...

• Modular reaction definitions (.yaml)
• Metabolite pool initialization (.yaml)
• Time-step simulation with concentration tracking
• Optional automatic adjustment of reaction rates to reach steady state

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🧬 Example Run on manual test

cd simulate/manual_test/liver-bigger
python test.py