Skip to content

Fix gzipped PDBML parsing - #149

Closed
diegozea wants to merge 1 commit into
masterfrom
52l1m1-codex/fix-issue-#147-in-mitos.jl
Closed

Fix gzipped PDBML parsing#149
diegozea wants to merge 1 commit into
masterfrom
52l1m1-codex/fix-issue-#147-in-mitos.jl

Conversation

@diegozea

@diegozea diegozea commented Jul 5, 2025

Copy link
Copy Markdown
Owner

Summary

  • handle .xml.gz PDBML files by decompressing before calling LightXML.parse_*
  • refactor _read to reduce redundancy between gzipped and plain XML paths

Testing

  • julia --project -e 'push!(LOAD_PATH, "test"); using MIToSTests; MIToSTests.retest(); MIToSTests.retest()' (fails: Stale dependencies)

https://chatgpt.com/codex/tasks/task_b_68679f536370832dbfd17ce1b87f6bad

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant