Adds the MIINT extension to support microbiome data analysis#1202
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wasade wants to merge 2 commits intoduckdb:mainfrom
Open
Adds the MIINT extension to support microbiome data analysis#1202wasade wants to merge 2 commits intoduckdb:mainfrom
wasade wants to merge 2 commits intoduckdb:mainfrom
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Features: * IO support for primary formats (fastx, SAM/BAM, BIOM, GFF, Newick, etc) * Efficient operations over alignment data * Align using minimap2 or bowtie2 via table function * Coverage calculations * NCBI querying and data retrieval * And more
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Features:
I am unsure whether the
copy_formats.csvis structured correctly for expressing the available outputs from this extension. Please let me know if there are changes that would be helpful