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1. ont-merge ont-merge Public

   Just combining all the reads for each barcode after an ONT run.

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2. reorder_flye_assembly reorder_flye_assembly Public

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3. mummerPlotGenerator mummerPlotGenerator Public

   Mummerplot generator using R for better visual customization.

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4. accession-dl accession-dl Public

   This script leverages NCBI's EDirect tools (`esearch` and `efetch`) to fetch nucleotide sequences based on accession numbers listed in a file. Designed for batch processing large datasets.

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5. bactopia bactopia Public

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   A flexible pipeline for complete analysis of bacterial genomes

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6. pavian pavian Public

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   🌈 Interactive analysis of metagenomics data

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