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When should I set --Freq_fixed=TRUE in calculating inbreeding Coefficient?

Status: Open.

#21 In fgvieira/ngsF;

· wul88 opened on Feb 7, 2023

Difference estimation ANGSD / ngsF

Status: Open.

#19 In fgvieira/ngsF;

· jbruxaux opened on Apr 7, 2022

Number of sites in .mafs.gz different from angsd

Status: Open.

#18 In fgvieira/ngsF;

· bvaditi opened on Dec 25, 2021

Allow for non-variable sites

enhancement

Status: Open.

#6 In fgvieira/ngsF;

· fgvieira opened on Jan 4, 2013

Calculate individual loglkl

enhancement

Status: Open.

#5 In fgvieira/ngsF;

· fgvieira opened on Jan 4, 2013

Alow for arbitrary ploidy

enhancement

Status: Open.

#4 In fgvieira/ngsF;

· fgvieira opened on Jan 4, 2013

Allow for negative F

enhancement

Status: Open.

#3 In fgvieira/ngsF;

· fgvieira opened on Jan 4, 2013

Accelerated EM

enhancement

Status: Open.

#2 In fgvieira/ngsF;

· fgvieira opened on Jan 4, 2013

pthreads for LKL calculation

enhancement

Status: Open.

#1 In fgvieira/ngsF;

· fgvieira opened on Jan 4, 2013