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Fix exclude strands argument name change
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#156:
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Add links to github repo in documentation
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Put explicit little endian format in documentation for unique lengths
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Fix minor README typos
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Fix for README table formatting
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Update docs and README with some public datasets available
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Assign strand alignment default to search configuration for easier te…
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Add option to enforced stranded k-mer matching across sequence/index …
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Change so search find a single occurence in all indices per sequence
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Change so search find a single occurence in all indices per sequence
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Clarify minor documentation issues
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Update tests with new search configuration
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Search configuration and parameter validation reorganization
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Search configuration and parameter validation reorganization
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Add feature to handle mulitple indices and sequences simulatenously
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Add more error message reporting to index generation
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Update tests for the no reverse-complement option
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Add option to skip counting on the reverse-complement strand
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Check if the index file exists before attempting search
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