HRA v2.4

apps/apps.humanatlas.io/src/app/app.component.ts

@@ -73,9 +73,9 @@ export class AppComponent extends BaseApplicationComponent {
 
   /** Call to action message */
   protected readonly cta: CtaConfig = {
-    description: '🎉  9th Release (v2.3) has arrived!',
+    description: '🎉  10th Release (v2.4) has arrived!',
     action: 'Learn more',
-    url: 'https://humanatlas.io/release-notes/v2.3',
+    url: 'https://humanatlas.io/release-notes/v2.4',
   };
 
   /** Whether the CTA is dismissed or not */

apps/ccf-eui/src/environments/environment.staging.ts

@@ -7,7 +7,7 @@ export const environment = {
     'https://data.sennetconsortium.org',
   ],
   dbOptions: {
-    remoteApiEndpoint: 'https://apps.humanatlas.io/api',
+    remoteApiEndpoint: 'https://apps.humanatlas.io/api--staging',
   },
   customization: {
     theme: 'hubmap',

apps/ccf-eui/src/environments/environment.ts

@@ -11,7 +11,7 @@ export const environment = {
     'https://data.sennetconsortium.org',
   ],
   dbOptions: {
-    remoteApiEndpoint: 'https://apps.humanatlas.io/api',
+    remoteApiEndpoint: 'https://apps.humanatlas.io/api--staging',
   },
   customization: {
     theme: 'default',

apps/ccf-rui/src/environments/environment.staging.ts

@@ -4,8 +4,8 @@ export const environment = {
   disableDbWorker: true,
   dbOptions: {},
   customization: {
-    collisionsEndpoint: 'https://apps.humanatlas.io/api/v1/collisions',
-    referenceData: 'https://apps.humanatlas.io/api/v1/rui-reference-data',
+    collisionsEndpoint: 'https://apps.humanatlas.io/api--staging/v1/collisions',
+    referenceData: 'https://apps.humanatlas.io/api--staging/v1/rui-reference-data',
   },
   skipUnsavedChangesConfirmation: false,
 };

apps/ccf-rui/src/environments/environment.ts

@@ -7,8 +7,8 @@ export const environment = {
   disableDbWorker: true,
   dbOptions: {},
   customization: {
-    collisionsEndpoint: 'https://apps.humanatlas.io/api/v1/collisions',
-    referenceData: 'https://apps.humanatlas.io/api/v1/rui-reference-data',
+    collisionsEndpoint: 'https://apps.humanatlas.io/api--staging/v1/collisions',
+    referenceData: 'https://apps.humanatlas.io/api--staging/v1/rui-reference-data',
   },
   skipUnsavedChangesConfirmation: true,
 };

apps/docs.humanatlas.io/public/assets/content/knowledge-graph-page/data.yaml

@@ -17,12 +17,12 @@ content:
       component: Markdown
       data: |
         The current version of the HRA-KG encompasses:
-        - 71 distinct human organs
-        - 5,800 detailed anatomical structures
-        - 2,268 precisely classified cell types
-        - 2,531 rigorously defined biomarkers
-        - 10 million nodes interconnected by 171 million edges
-        - Approximately 126 GB of graph data
+        - 77 distinct human organs
+        - 5,924 detailed anatomical structures
+        - 2,313 precisely classified cell types
+        - 2,570 rigorously defined biomarkers
+        - 11 million nodes interconnected by 189 million edges
+        - Approximately 137 GB of graph data
 
         The Knowledge Graph supports semantic queries, detailed analytics, and seamless integration with external applications and platforms.
 

apps/docs.humanatlas.io/src/app/app.component.ts

@@ -29,9 +29,9 @@ export class AppComponent extends BaseApplicationComponent {
 
   /** Call to action message */
   protected readonly cta: CtaConfig = {
-    description: '🎉  9th Release (v2.3) has arrived!',
+    description: '🎉  10th Release (v2.4) has arrived!',
     action: 'Learn more',
-    url: 'https://humanatlas.io/release-notes/v2.3',
+    url: 'https://humanatlas.io/release-notes/v2.4',
   };
 
   /** Whether the CTA is dismissed or not */

apps/humanatlas.io/src/app/app.component.ts

@@ -35,9 +35,9 @@ export class AppComponent extends BaseApplicationComponent {
 
   /** Call to action message */
   protected readonly cta: CtaConfig = {
-    description: '🎉  9th Release (v2.3) has arrived!',
+    description: '🎉  10th Release (v2.4) has arrived!',
     action: 'Learn more',
-    url: 'https://humanatlas.io/release-notes/v2.3',
+    url: 'https://humanatlas.io/release-notes/v2.4',
   };
 
   /** Whether the CTA is dismissed or not */

apps/humanatlas.io/src/app/app.routes.ts

@@ -223,7 +223,7 @@ export const appRoutes: Route[] = [
     pathMatch: 'full',
     // Preferably this would redirect to the latest version based on the versions data
     // But it is not available at this point. Async redirectTo may become available in angular 20
-    redirectTo: '/release-notes/v2.3',
+    redirectTo: '/release-notes/v2.4',
   },
   {
     path: 'release-notes/:version',

apps/humanatlas.io/src/assets/content/2d-ftu-illustrations/table-data/ftu-cell-counts.csv

@@ -64,6 +64,12 @@ lung,alveolus of lung,UBERON:0002299,lung pericyte,CL:0009089,0,2
 lung,alveolus of lung,UBERON:0002299,pulmonary alveolar type 1 cell,CL:0002062,0,14
 lung,alveolus of lung,UBERON:0002299,pulmonary alveolar type 2 cell,CL:0002063,0,6
 lung,alveolus of lung,UBERON:0002299,secondary crest myofibroblast,CL:4033016,0,9
+lung,bronchus submucosal gland,UBERON:8410043,airway submucosal gland collecting duct epithelial cell,CL:4033023,0,2
+lung,bronchus submucosal gland,UBERON:8410043,airway submucosal gland duct basal cell,CL:4033024,0,12
+lung,bronchus submucosal gland,UBERON:8410043,airway submucosal gland duct multiciliated cell,CL:4033055,0,16
+lung,bronchus submucosal gland,UBERON:8410043,mucus secreting cell of bronchus submucosal gland,CL:4033022,0,52
+lung,bronchus submucosal gland,UBERON:8410043,myoepithelial cell of bronchus submucosal gland,CL:4033003,0,20
+lung,bronchus submucosal gland,UBERON:8410043,serous secreting cell of bronchus submucosal gland,CL:4033005,0,55
 mouth,parotid gland,UBERON:0001831,IgA plasma cell,CL:0000987,0,13
 mouth,parotid gland,UBERON:0001831,adipocyte,CL:0000136,0,1
 mouth,parotid gland,UBERON:0001831,dendritic cell,CL:0000451,0,1
@@ -123,7 +129,7 @@ skin of body,epidermal ridge of digit,UBERON:0013487,Merkel cell,CL:0000242,0,2
 skin of body,epidermal ridge of digit,UBERON:0013487,basal cell,CL:0000646,0,35
 skin of body,epidermal ridge of digit,UBERON:0013487,epidermal Langerhans cell,CL:0002457,0,3
 skin of body,epidermal ridge of digit,UBERON:0013487,melanocyte of skin,CL:1000458,0,4
-skin of body,epidermal ridge of digit,UBERON:0013487,prickle cell,CL:0000649,0,104
+skin of body,epidermal ridge of digit,UBERON:0013487,spinous cell of epidermis,CL:0000649,0,104
 skin of body,hair follicle,UBERON:0002073,arrector muscle of hair,UBERON:0002033,1,0
 skin of body,hair follicle,UBERON:0002073,cortex of hair,UBERON:0002077,1,0
 skin of body,hair follicle,UBERON:0002073,cuticle of hair,UBERON:0002076,1,0