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1. classical-gene-prediction classical-gene-prediction Public

   Python

2. PANICLE PANICLE Public

   Python package for Genome-Wide Association Studies (GWAS). Implements GLM, MLM, FarmCPU, and BLINK with support for VCF, PLINK, HapMap, and CSV genotype formats.

   Python 15 6

3. pySpATS pySpATS Public

   Python implementation of Spatial Analysis of Field Trials with Splines (SpATS)

   Python 1

4. qTeller qTeller Public

   RNA-seq processing pipeline and modular web interface

   Python 3