Bump scipy from 1.3.3 to 1.5.0

[dependabot-preview]

Bumps scipy from 1.3.3 to 1.5.0.

Release notes

Sourced from scipy's releases.

SciPy 1.5.0 Release Notes

SciPy 1.5.0 is the culmination of 6 months of hard work. It contains many new features, numerous bug-fixes, improved test coverage and better documentation. There have been a number of deprecations and API changes in this release, which are documented below. All users are encouraged to upgrade to this release, as there are a large number of bug-fixes and optimizations. Before upgrading, we recommend that users check that their own code does not use deprecated SciPy functionality (to do so, run your code with python -Wd and check for DeprecationWarning s). Our development attention will now shift to bug-fix releases on the 1.5.x branch, and on adding new features on the master branch.

This release requires Python 3.6+ and NumPy 1.14.5 or greater.

For running on PyPy, PyPy3 6.0+ and NumPy 1.15.0 are required.

Highlights of this release

• wrappers for more than a dozen new LAPACK routines are now available in scipy.linalg.lapack
• Improved support for leveraging 64-bit integer size from linear algebra backends
• addition of the probability distribution for two-sided one-sample Kolmogorov-Smirnov tests

New features

scipy.cluster improvements

Initialization of scipy.cluster.vq.kmeans2 using minit="++" had a quadratic complexity in the number of samples. It has been improved, resulting in a much faster initialization with quasi-linear complexity.

scipy.cluster.hierarchy.dendrogram now respects the matplotlib color palette

scipy.fft improvements

A new keyword-only argument plan is added to all FFT functions in this module. It is reserved for passing in a precomputed plan from libraries providing a FFT backend (such as PyFFTW and mkl-fft), and it is currently not used in SciPy.

scipy.integrate improvements

Commits

• 4c0fd79 REL: set version to 1.5.0 "final"
• ce8c972 Merge pull request #12391 from tylerjereddy/prep_scipy_150_final
• d60c1b3 MAINT: prepare for SciPy 1.5.0 "final"
• a7131fa REL: set version to 1.5.0rc2 released
• 896480b Merge pull request #12345 from tylerjereddy/treddy_150rc2_backports
• 1e5c8d9 DOC: 1.5.0rc2 release notes update
• e468042 CI: don't install pydata/sparse when running on Numpy prerelease
• 3d96899 CI: split travis arm64 run into two
• a3795e9 DOC: update SciPy 1.5.0rc2 release notes
• 9803615 MAINT: Work around Sphinx bug (#12335)
• Additional commits viewable in compare view

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[codecov]

Codecov Report

Merging #228 into master will decrease coverage by 0.09%.
The diff coverage is n/a.

@@            Coverage Diff             @@
##           master     #228      +/-   ##
==========================================
- Coverage   82.24%   82.15%   -0.10%     
==========================================
  Files         112      113       +1     
  Lines        9406     9408       +2     
==========================================
- Hits         7736     7729       -7     
- Misses       1670     1679       +9     

Flag	Coverage Δ
#unittests	82.15% <ø> (-0.10%)	⬇️

Impacted Files	Coverage Δ
src/evalg/genprog/generators.py	86.45% <0.00%> (-8.34%)	⬇️
src/evalg/genprog/mutation.py	90.90% <0.00%> (-1.02%)	⬇️
src/__init__.py	100.00% <0.00%> (ø)

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[dependabot-preview]

Superseded by #237.