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1. MBGAP-pipeline MBGAP-pipeline Public

   O MBGAP é uma pipeline automatizada para análise de genomas bacterianos a partir de dados de sequenciamento de nova geração (NGS) no formato paired-end Illumina.

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2. SRA_download_script SRA_download_script Public

   Bash script for automated sequencing data download from NCBI SRA, with automatic layout detection (single-end or paired-end), automatic fallback between fasterq-dump and fastq-dump, integrity valid…

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3. MK-FluPipe_NF MK-FluPipe_NF Public

   MK Flu-Pipe Nextflow is the Nextflow DSL2 implementation of the MK Flu-Pipe Influenza workflow.

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