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Pull requests: nextflow-io/nextflow

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Pull requests list

Fix spurious 'Unrecognized config option' warning for wave.build.compression and wave.build.conda
#7355 opened Jul 17, 2026 by pditommaso Member Loading…
1
Fix lint reporting of excluded paths
#7354 opened Jul 17, 2026 by bentsherman Member Loading…
1
1
Report syntax error for unexpected character in gstring
#7353 opened Jul 16, 2026 by bentsherman Member Loading…
1
1
Add singularity.resourceLimits config option software/singularity
#7352 opened Jul 16, 2026 by bentsherman Member Loading…
1
2
Fix plugin blocks incorrectly merged in v2 config parser lang/config
#7350 opened Jul 16, 2026 by bentsherman Member Loading…
2
1
Fix race condition calling workflow onComplete twice
#7349 opened Jul 16, 2026 by bentsherman Member Loading…
1
2
Guard trace log against string formatting errors
#7347 opened Jul 16, 2026 by bentsherman Member Loading…
1
1
Formatter overhaul: never remove comments, fmt directives, line wrapping, K&R style
#7346 opened Jul 16, 2026 by ewels Member Loading…
1
Drop transient object tags when publishing files to S3
#7344 opened Jul 16, 2026 by pditommaso Member Loading…
1
2
Add scheduling.provisioningModel per-process hint for Google Batch
#7343 opened Jul 15, 2026 by reece-maticebio Loading…
1
1
ADR: Workflow modules lang/modules
#7342 opened Jul 15, 2026 by bentsherman Member Loading… 26.10
10
Update nf-azure: Add Azure Compute Gallery image and verification options
#7338 opened Jul 15, 2026 by LennyBEL Loading…
21
Update nf-azure: Add Azure Batch node communication mode option
#7337 opened Jul 15, 2026 by LennyBEL Loading…
7
Fix concurrent modification with job arrays
#7332 opened Jul 13, 2026 by bentsherman Member Loading…
1
5
Support authenticated forward HTTP/HTTPS proxies across the client stack
#7331 opened Jul 13, 2026 by pditommaso Member Loading…
1
2
Add ast-grep Groovy lint foundations
#7330 opened Jul 13, 2026 by edmundmiller Member Loading…
1
Fix jackson & netty CVEs via api-scoped dependency constraints
#7329 opened Jul 13, 2026 by jorgee Contributor Loading…
1
Add support for multiple Azure Container Registries
#7318 opened Jul 9, 2026 by adamrtalbot Collaborator Loading…
1
Package directive
#7317 opened Jul 9, 2026 by evanroyrees • Draft
Add managed identity support for Azure Batch container registries
#7316 opened Jul 9, 2026 by adamrtalbot Collaborator Loading…
5
ADR: nextflow doctor command
#7311 opened Jul 8, 2026 by edmundmiller Member Loading…
1
build(java): align toolchain and runtime to Java 25 (bytecode 17)
#7310 opened Jul 8, 2026 by cristianrcv Contributor Loading…
1
feat: add plugin directory trust guard to harden shared plugin caches
#7308 opened Jul 8, 2026 by aknownuser Loading…
9
fix: prevent world-readable race window when storing local secrets security
#7307 opened Jul 8, 2026 by aknownuser Loading…
2
Fix AWS Batch task polling forever when the job is missing from the DescribeJobs response
#7302 opened Jul 3, 2026 by item084 Loading…
1
1
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