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funannotate v0.3.0

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@nextgenusfs nextgenusfs released this 15 Jun 15:12
· 1164 commits to master since this release
0.3.0
021da94
  • improvements to the gene model filtering in funannotate predict, ability to keep gene models without proper stop codons if desired, --keep_no_stops
  • augustus is now multi-threaded
  • upgrade of packaged BUSCO to v1.2, slightly faster runtime and simplified code
  • non-fungal options are now included in funannotate, however use with non fungal genomes has not been extensively tested. Options of note are --organism, --busco_db, --eggnog_db
  • secondary metabolism enzymes added to funannotate compare if genomes were annotated with antiSMASH
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