3.18.1

3.18.1

Fix: allow --output-annotation-gff and --output-annotation-tbl as sole output arguments

Nextclade CLI now correctly allows --output-annotation-gff and --output-annotation-tbl to be used as standalone output arguments without requiring other output files like --output-tsv or --output-all. Previously, using only these annotation output arguments would incorrectly trigger an error requiring at least one other output file argument to be specified. See #1707 for details. Thanks @ammaraziz for bug report.

Installation and usage 📚 Documentation: docs.nextstrain.org/projects/nextclade 🌍 Nextclade Web: clades.nextstrain.org 🖥️ Nextclade CLI: 📥 Standalone native executables can be downloaded using the links in the "Assets" section just below. Mind the different operating systems and computer architectures. 🐋 Docker images are available on DockerHub 🐍 Conda package is available in bioconda channel. ⌨️ Source code is on GitHub: github.com/nextstrain/nextclade 🚩 Report bugs, suggest features by submitting a GitHub issue 💾 Nextclade datasets are here