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@jonasscheid jonasscheid released this 07 Jan 15:47
· 167 commits to master since this release
3.1.0
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Learn about vigilant mode.

3.1.0 - BlüBa - 07/01/26

Added

  • Added a peptidoform column to the pipeline output #376
  • Added Boxplot of intensity distributions to the MulitQC report #382
  • Added a config option to hide outliers in box plots, add plot descriptions #387
  • Added a Fasta column to the input samplesheet to enable sample-specific FASTA files #391
  • Added a column for unique accessions to the pipeline output #403

Fixed

  • Fixed an issue with not providing the full process name in conf/base.config #384
  • Template update 3.1.1, migrate to nf-test #379
  • Fixed the binning of the TICs histogram and move the general stats table to the top of the report #388
  • Write out FDR-filtered peptide list in global FDR-mode, instead of 100% FDR list #394
  • Update labels for global FDR process configurations #397
  • Remove special character '#' from the header of OpenMS TextExporter output #403
  • Fixed an issue in the summary process that led the pipeline crash if deeplc was not specified #411

Dependencies

Dependency Old version New version
EasyPQP 0.1.51 0.1.53
Epicore 0.1.6
MultiQC 1.28.0 1.31.0
Nf-core 3.2.1 3.4.1
OpenMS 3.4.0 3.4.1
Assets 2
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