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Update contributors list in manifest#448

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JoseEspinosa wants to merge 4 commits intonf-core:devfrom
JoseEspinosa:maintainers
Open

Update contributors list in manifest#448
JoseEspinosa wants to merge 4 commits intonf-core:devfrom
JoseEspinosa:maintainers

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@JoseEspinosa
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@JoseEspinosa JoseEspinosa commented Jan 27, 2026 •
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This PR updates the contributors section in the nextflow.config manifest to better reflect everyone who has contributed to the pipeline.

For reference, the different nf-core contribution types are described here.

Added @luisas and @l-mansouri as authors and contributors (originally involved in pipeline development)
Added @jscgh, @keiran-rowell-unsw, @abotlp, and @tlitfin as maintainers and contributors.
Added @ziadbkh, @nbtm-sh, and @vagkaratzas as contributors

All the people mentioned above, please review your entry and confirm or update your data there. Also, if you want to be removed or if you think someone else should be there, please let me know.

If you are OK with your data, then just approve the PR

Thanks!

Closes #285

PR checklist

  • This comment contains a description of changes (with reason).
  • Make sure your code lints (nf-core lint).
  • CHANGELOG.md is updated.

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github-actions bot commented Jan 27, 2026 •
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nf-core pipelines lint overall result: Passed ✅ ⚠️

Posted for pipeline commit a624625

+| ✅ 328 tests passed       |+
#| ❔   4 tests were ignored |#
!| ❗  33 tests had warnings |!
Details

❗ Test warnings:

  • files_exist - File not found: conf/igenomes.config
  • files_exist - File not found: conf/igenomes_ignored.config
  • pipeline_todos - TODO string in base.config: Check the defaults for all processes
  • pipeline_todos - TODO string in base.config: Customise requirements for specific processes.
  • pipeline_todos - TODO string in methods_description_template.yml: #Update the HTML below to your preferred methods description, e.g. add publication citation for this pipeline
  • pipeline_todos - TODO string in main.nf: Optionally add in-text citation tools to this list.
  • pipeline_todos - TODO string in main.nf: Optionally add bibliographic entries to this list.
  • pipeline_todos - TODO string in main.nf: Only uncomment below if logic in toolCitationText/toolBibliographyText has been filled!
  • pipeline_todos - TODO string in usage.md: Add documentation about anything specific to running your pipeline. For general topics, please point to (and add to) the main nf-core website.
  • pipeline_todos - TODO string in nextflow.config: Specify any additional parameters here
  • schema_description - No description provided in schema for parameter: rosettafold2na_uniref30_link
  • schema_description - No description provided in schema for parameter: rosettafold2na_bfd_link
  • schema_description - No description provided in schema for parameter: rosettafold2na_pdb100_link
  • schema_description - No description provided in schema for parameter: rosettafold2na_weights_link
  • schema_description - No description provided in schema for parameter: rfam_full_region_link
  • schema_description - No description provided in schema for parameter: rfam_cm_link
  • schema_description - No description provided in schema for parameter: rnacentral_rfam_annotations_link
  • schema_description - No description provided in schema for parameter: rnacentral_id_mapping_link
  • schema_description - No description provided in schema for parameter: rnacentral_sequences_link
  • schema_description - No description provided in schema for parameter: rosettafold2na_uniref30_path
  • schema_description - No description provided in schema for parameter: rosettafold2na_bfd_path
  • schema_description - No description provided in schema for parameter: rosettafold2na_pdb100_path
  • schema_description - No description provided in schema for parameter: rosettafold2na_weights_path
  • local_component_structure - post_processing.nf in subworkflows/local should be moved to a SUBWORKFLOW_NAME/main.nf structure
  • local_component_structure - prepare_rosettafold_all_atom_dbs.nf in subworkflows/local should be moved to a SUBWORKFLOW_NAME/main.nf structure
  • local_component_structure - prepare_rosettafold2na_dbs.nf in subworkflows/local should be moved to a SUBWORKFLOW_NAME/main.nf structure
  • local_component_structure - prepare_alphafold3_dbs.nf in subworkflows/local should be moved to a SUBWORKFLOW_NAME/main.nf structure
  • local_component_structure - prepare_colabfold_dbs.nf in subworkflows/local should be moved to a SUBWORKFLOW_NAME/main.nf structure
  • local_component_structure - aria2_uncompress.nf in subworkflows/local should be moved to a SUBWORKFLOW_NAME/main.nf structure
  • local_component_structure - prepare_esmfold_dbs.nf in subworkflows/local should be moved to a SUBWORKFLOW_NAME/main.nf structure
  • local_component_structure - prepare_helixfold3_dbs.nf in subworkflows/local should be moved to a SUBWORKFLOW_NAME/main.nf structure
  • local_component_structure - prepare_boltz_dbs.nf in subworkflows/local should be moved to a SUBWORKFLOW_NAME/main.nf structure
  • local_component_structure - prepare_alphafold2_dbs.nf in subworkflows/local should be moved to a SUBWORKFLOW_NAME/main.nf structure

❔ Tests ignored:

✅ Tests passed:

Run details

  • nf-core/tools version 3.5.1
  • Run at 2026-01-30 09:45:40

jscgh
jscgh reviewed Jan 27, 2026
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Confirming my details are correct.

vagkaratzas
vagkaratzas approved these changes Jan 28, 2026
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Correct for me as well! Thanks :D

@nbtm-sh
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nbtm-sh commented Jan 28, 2026

Confirming my details are correct. Thanks :)

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@jscgh jscgh jscgh left review comments

@tlitfin tlitfin tlitfin approved these changes

@vagkaratzas vagkaratzas vagkaratzas approved these changes

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5 participants

@JoseEspinosa @nbtm-sh @tlitfin @vagkaratzas @jscgh