Use cases

DaSH Use Cases

please feel free to add your own, either by editing the wiki and making suggesstions in the comments

1. Given genotyping data (raw reads?)

2. process and interpret

3. submit raw reads to SRA-like registry; obtain submission ID and SRA # (could be a file path for hackathon?)

4. submit methodology to GTR or reuse and existing one; obtain GTR ID and Accession # (file path for hackathon?)

5. create GL String, register with gl.nmdp.org, obtain URI

6. create HML

7. syntactic and semantic validation including MIRING check

8. given HML containing NGS data

9. syntatic and semantic validation including MIRING check

10. retrieve raw reads if they exist

11. retrieve GTR - get methodology

12. re-interpretation

13. retrieve GL String

14. compare results

15. convert GL String to MAC