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    • micropipe

      Public
      A pipeline for high-quality bacterial genome construction using ONT sequencing
      HTML
      GNU General Public License v3.0
      93820Updated Sep 22, 2022Sep 22, 2022
    • Assemblies for CREATE-Q CPE manuscript
      0000Updated Nov 2, 2019Nov 2, 2019
    • DiscoPlot

      Public
      Visualising discordant reads
      Python
      GNU General Public License v3.0
      4202Updated Mar 5, 2018Mar 5, 2018
    • R scripts for ST131_200 study
      R
      1200Updated Apr 1, 2016Apr 1, 2016
    • Lab Website
      HTML
      9510Updated Oct 8, 2015Oct 8, 2015
    • Tool for visualising assemblies.
      Python
      GNU General Public License v3.0
      2101Updated Sep 15, 2015Sep 15, 2015
    • ST131_99

      Public
      Data for - Global dissemination of a multidrug resistant Escherichia coli clone
      2300Updated Mar 25, 2015Mar 25, 2015
    • SeqFindR

      Public
      [MIRROR] A tool to easily create informative genomic feature plots
      Python
      Other
      1820Updated Dec 7, 2014Dec 7, 2014
    • Generate barcode like images representing unique plasmid element hits from you NGS data
      0000Updated Jun 25, 2014Jun 25, 2014
    • Generate dynamic SeqFindr plots using D3.js library
      JavaScript
      0100Updated Jun 25, 2014Jun 25, 2014
    • Beatson Lab Prepublication data statement
      0000Updated Jun 1, 2014Jun 1, 2014
    • VFDB

      Public
      [MIRROR] Virulence factors, other sequences of interest & Islands. For ST131 99 manuscript. SeqFindR formatted
      Python
      1000Updated May 14, 2014May 14, 2014
    • samplemod

      Public
      Beatson Group sample/base python project. This simple project is an example repo/bootstrap repo for python projects
      Python
      Other
      1010Updated Apr 1, 2014Apr 1, 2014
    • TraDIS data web portal
      Ruby
      Other
      0010Updated Mar 28, 2014Mar 28, 2014
    • Beatson Group sample/base python script
      0000Updated Jul 18, 2013Jul 18, 2013
    • Core/generic bioinformatics scripts. Contains submodule links to all smaller script packages within the Beatson Microbial Genomics group
      0200Updated Jun 28, 2013Jun 28, 2013
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