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    13 repositories

    • singlepp

      Public
      Pure C++ implementation of the SingleR method for cell type annotation
      C++
      •
      MIT License
      •0•1•0•0•Updated Feb 23, 2026Feb 23, 2026

    • SingleR

      Public
      Clone of the Bioconductor repository for the SingleR package.
      bioconductorsingler
      R
      •
      GNU General Public License v3.0
      •20•199•17•1•Updated Feb 23, 2026Feb 23, 2026

    • singler_classic_markers

      Public
      Classic marker detection for SingleR
      C++
      •
      MIT License
      •0•0•0•0•Updated Feb 23, 2026Feb 23, 2026

    • test-sparse_l2_norm

      Public
      Performance testing for computing correlations between sparse queries/references
      C++
      •
      MIT License
      •0•0•0•0•Updated Feb 22, 2026Feb 22, 2026

    • singler-py

      Public
      Python bindings for SingleR
      Python
      •
      MIT License
      •0•14•4•0•Updated Jan 6, 2026Jan 6, 2026

    • singlepp_loaders

      Public
      Load reference datasets for SingleR
      C++
      •
      MIT License
      •0•0•0•0•Updated Nov 27, 2025Nov 27, 2025

    • SingleRBook

      Public
      The package wrapping the book, for deployment via the Bioconductor build system.
      bioconductorsingler
      TeX
      •1•6•0•0•Updated Mar 21, 2025Mar 21, 2025

    • celldex-py

      Public
      Collection of reference cell type datasets
      single-cell
      Python
      •
      MIT License
      •0•1•0•0•Updated Jan 8, 2025Jan 8, 2025

    • language-comparison

      Public
      Check consistency between R and Python bindings
      R
      •
      MIT License
      •0•0•0•0•Updated Jan 8, 2025Jan 8, 2025

    • .github

      Public
      Organization overview.
      MIT License
      •0•0•0•0•Updated Jan 1, 2025Jan 1, 2025

    • celldex

      Public
      Collection of cell type reference datasets.
      R
      •8•64•15•0•Updated May 31, 2024May 31, 2024

    • SingleRBook-base

      Public archive
      See https://github.com/LTLA/SingleRBook for the latest version of this content.
      bioconductorsingler
      TeX
      •7•12•1•0•Updated Jun 21, 2022Jun 21, 2022

    • SingleRBook-old

      Public archive
      Old compiled version of the SingleR book.
      singler
      0•0•0•0•Updated Nov 2, 2020Nov 2, 2020