Repositories list

• dFC

  Public
  An implementation of several well-known dynamic Functional Connectivity assessment methods.

  Python

  •

  MIT License

  •8•31•8•5•Updated Apr 1, 2026Apr 1, 2026

• nipoppy-ppmi

  Public
  Process long and prosper

  Python

  •

  MIT License

  •30•3•1•0•Updated Mar 26, 2026Mar 26, 2026

• file_tree_check

  Public
  File checking project for McGill NeuroDataScience - ORIGAMI lab

  Python

  •

  MIT License

  •1•2•13•2•Updated Mar 16, 2026Mar 16, 2026

• cohort_creator

  Public
  Creates a neuroimaging cohort by aggregating data across datasets.

  Python

  •

  MIT License

  •2•1•41•7•Updated Mar 16, 2026Mar 16, 2026

• nipoppy-pipeline-configs

  Public
  Pipeline configurations for Nipoppy (https://github.com/nipoppy/nipoppy/)

  Python

  •1•0•6•4•Updated Mar 16, 2026Mar 16, 2026

• QLS-course-materials

  Public
  Materials for the NeuroDataScience Course (McGill QLSC612)

  Jupyter Notebook

  •24•12•0•1•Updated Mar 16, 2026Mar 16, 2026

• fl-pd

  Public
  Federated learning experiments on PD/AD datasets

  Python

  •

  MIT License

  •0•0•0•0•Updated Mar 10, 2026Mar 10, 2026

• QLS612-Overview

  Public
  The course website for QLS612

  SCSS

  •

  Creative Commons Zero v1.0 Universal

  •8•3•6•1•Updated Mar 9, 2026Mar 9, 2026

• pipeline-variability-analysis-scripts

  Public
  Python

  •1•0•0•0•Updated Mar 6, 2026Mar 6, 2026

• NeuroCI

  Public
  Python

  •6•14•0•2•Updated Feb 19, 2026Feb 19, 2026

• us_climate_emotions_map

  Public
  Interactive infographic for survey results on climate change emotions of US youth

  Python

  •

  MIT License

  •2•0•5•5•Updated Jan 1, 2026Jan 1, 2026

• FIDS

  Public
  Python

  •

  GNU General Public License v3.0

  •0•0•1•3•Updated Jan 1, 2026Jan 1, 2026

• dFC_task_presence

  Public
  Project to improve classification of task vs. rest time points using dynamic functional connectivity

  Jupyter Notebook

  •

  MIT License

  •1•1•0•0•Updated Nov 8, 2025Nov 8, 2025

• fl-prog

  Public
  Federated disease progression modelling

  Jupyter Notebook

  •

  MIT License

  •0•0•1•0•Updated Nov 3, 2025Nov 3, 2025

• qpn_analysis

  Public
  Analysis repo for QPN-NC dataset paper

  Jupyter Notebook

  •

  Creative Commons Zero v1.0 Universal

  •1•0•0•0•Updated Oct 28, 2025Oct 28, 2025

• literature_mining_paper

  Public
  code to generate figures in "Mining the neuroimaging literature", elife

  Python

  •

  MIT License

  •0•0•0•0•Updated Aug 19, 2025Aug 19, 2025

• ukbb-cca

  Public
  Canonical Correlation Analysis on behavioural and brain imaging data from the UK Biobank

  Jupyter Notebook

  •1•6•0•0•Updated Aug 8, 2025Aug 8, 2025

• course-materials-2024

  Public
  Materials for the 2024 NeuroDataScience Course (McGill QLS612)

  Jupyter Notebook

  •0•1•0•0•Updated May 24, 2025May 24, 2025

• ComBat_validation

  Public
  Jupyter Notebook

  •0•0•0•0•Updated May 5, 2025May 5, 2025

• LoxLM

  Public
  LLM based process to aid DICOM to NIfTI conversoin.

  Jupyter Notebook

  •

  MIT License

  •0•2•1•4•Updated Apr 7, 2025Apr 7, 2025

• nipoppy-tractoflow

  Public
  A nipoppy wrapper for running the Tractoflow dMRI processing pipeline

  MIT License

  •1•0•0•0•Updated Mar 14, 2025Mar 14, 2025

• neurodatascience.github.io

  Public
  NeuroData Science Lab Website

  HTML

  •

  Other

  •1.3k•10•2•0•Updated Feb 25, 2025Feb 25, 2025

• analytical-flexibility-tool-metrics

  Public
  Metrics for tools described in analytical flexibility review paper

  Python

  •

  MIT License

  •0•0•0•0•Updated Feb 3, 2025Feb 3, 2025

• nipoppy-dmri-freewater

  Public
  scripts for running / building free water corrected diffusion tensor imaging w/ nipoppy

  Python

  •

  Apache License 2.0

  •2•2•3•0•Updated Dec 12, 2024Dec 12, 2024

• example_repo

  Public
  example repo for the Open Science Helpers program

  MIT License

  •0•0•0•0•Updated Aug 19, 2024Aug 19, 2024

• nipoppy-nimhans_retro

  Public
  Process long and prosper

  Jupyter Notebook

  •

  MIT License

  •30•0•0•0•Updated Jul 25, 2024Jul 25, 2024

• nipoppy-nimhans_YLO

  Public
  Fork for YLO PD setup at nimhans

  Jupyter Notebook

  •

  MIT License

  •30•0•0•1•Updated Jul 25, 2024Jul 25, 2024

• course-materials-2021

  Public
  Materials for the 2021 NeuroDataScience Course (McGill QLS612)

  Jupyter Notebook

  •12•1•0•1•Updated May 17, 2024May 17, 2024

• course-materials-2020

  Public
  Materials for the 2020 NeuroDataScience Course (McGill QLS612)

  Jupyter Notebook

  •35•30•0•1•Updated May 17, 2024May 17, 2024

• ecr-fair

  Public
  Jupyter Notebook

  •0•0•0•0•Updated May 12, 2024May 12, 2024