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    25 repositories

    • mixer

      Public
      Causal Mixture Model for GWAS summary statistics
      gwaslinkage-disequilibriumpopulation-geneticssummary-statistics
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •22•95•54•2•Updated Dec 17, 2025Dec 17, 2025

    • tsd_software

      Public
      Scripts to fetch specific binaries to be synced to TSD's s3-api dir
      Shell
      •
      MIT License
      •0•0•0•0•Updated Oct 22, 2025Oct 22, 2025

    • ukb

      Public
      Help tools to process UK Biobank data
      Python
      •1•7•0•0•Updated Oct 21, 2025Oct 21, 2025

    • sarek_offline

      Public
      Groovy
      •
      MIT License
      •1•0•0•0•Updated Oct 14, 2025Oct 14, 2025

    • gsa-mixer

      Public
      C
      •
      GNU General Public License v3.0
      •1•20•12•0•Updated Sep 12, 2025Sep 12, 2025

    • MoBa-diagnostics

      Public
      Code for re-formatting and cleaning up diagnostic data received from different sources for MoBa data
      R
      •0•0•0•0•Updated Sep 11, 2025Sep 11, 2025

    • wgs_pipeline

      Public
      Nextflow
      •0•0•0•0•Updated Sep 5, 2025Sep 5, 2025

    • mix3r

      Public
      Jupyter Notebook
      •2•8•5•0•Updated Jul 20, 2025Jul 20, 2025

    • pleiofdr

      Public
      Pleiotropy-informed conditional and conjunctional false discovery rate
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •14•36•18•0•Updated Jun 3, 2025Jun 3, 2025

    • GenoPredProtocols

      Public
      Inhouse protocols for running GenoPred on TSD or other offline environments
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Feb 26, 2025Feb 26, 2025

    • misc

      Public
      Misc of analysis
      Jupyter Notebook
      •2•0•0•0•Updated Jan 16, 2025Jan 16, 2025

    • container_template

      Public template
      Shell
      •
      GNU General Public License v3.0
      •0•0•3•1•Updated Dec 31, 2024Dec 31, 2024

    • mixer-pred

      Public
      R
      •0•3•0•0•Updated Dec 18, 2024Dec 18, 2024

    • mostest

      Public
      Multivariate Omnibus Statistical Test
      MATLAB
      •
      GNU General Public License v3.0
      •2•22•12•1•Updated Jul 2, 2024Jul 2, 2024

    • simu

      Public
      Fast and Efficient Tool to Simulate Summary Statistics from Genome-Wide Association Studies
      Shell
      •
      GNU General Public License v3.0
      •6•12•0•0•Updated May 21, 2024May 21, 2024

    • python_convert

      Public
      A collection of various utilities for GWAS summary statistics
      Python
      •
      GNU General Public License v3.0
      •15•32•28•1•Updated May 14, 2024May 14, 2024

    • emo_behav_pgs_traject

      Public
      Repository for the paper entiteled: Childhood trajectories of emotional and behavioral difficulties are related to polygenic liability for mood and anxiety diso…
      R
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated May 6, 2024May 6, 2024

    • MVP-PCa-PHS

      Public
      R
      •
      GNU General Public License v3.0
      •0•2•0•0•Updated Oct 10, 2022Oct 10, 2022

    • yunhoop

      Public
      Scripts and codes to facilitate gene discovery and genetic analysis
      Shell
      •0•2•0•0•Updated May 9, 2021May 9, 2021

    • ldsc

      Public
      LD Score Regression (LDSC)
      Python
      •
      GNU General Public License v3.0
      •368•1•0•0•Updated Mar 25, 2021Mar 25, 2021

    • courses

      Public
      0•0•0•0•Updated Mar 28, 2019Mar 28, 2019

    • seek

      Public
      For finding, sharing and exchanging Data, Models, Simulations and Processes in Science.
      Ruby
      •
      Other
      •58•0•0•0•Updated Oct 22, 2018Oct 22, 2018

    • zlib

      Public
      A massively spiffy yet delicately unobtrusive compression library.
      C
      •2.7k•0•0•0•Updated Sep 4, 2018Sep 4, 2018

    • big5-risk-scores-for-borderline

      Public
      Polygenic risk scores using Big-5 GWAS for Streit et al borderline analysis
      Shell
      •0•1•0•0•Updated Aug 3, 2018Aug 3, 2018

    • sandbox

      Public
      Public sandbox repository for misc experiments
      Python
      •
      MIT License
      •0•0•0•1•Updated Oct 11, 2016Oct 11, 2016