Update (01/19/2022):
Data has been updated to 01/13/2022. The user can verify *.json files in data_tool folder before moving to main folder.
Update(01/12/2022):
- Manually download Orphan drug data from U.S. FDA site (Data Source)
- Resave the file into .csv format with a meaning name (e.g., FDA_011322.csv)
- Mnaually download MetamapLite NIH site (Text Parsing Tool)
- Change 'MetaMap_path' and 'source_file' in the main program (process_fda_file.py) based on the file location
- Run the program (with or without record row id) to produce output files (new_df2.xlsx, fda_disease.json and fda_drug.json)
- Manually review the final output file (new_df2.xlsx) to adjust any wrong parsing content and reprodce json files if necessary
- Rename *.json into data.json based on different plugin and move it to upper folder
===old project report