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Update (01/19/2022):

Data has been updated to 01/13/2022. The user can verify *.json files in data_tool folder before moving to main folder.

Update(01/12/2022):

  1. Manually download Orphan drug data from U.S. FDA site (Data Source)
  2. Resave the file into .csv format with a meaning name (e.g., FDA_011322.csv)
  3. Mnaually download MetamapLite NIH site (Text Parsing Tool)
  4. Change 'MetaMap_path' and 'source_file' in the main program (process_fda_file.py) based on the file location
  5. Run the program (with or without record row id) to produce output files (new_df2.xlsx, fda_disease.json and fda_drug.json)
  6. Manually review the final output file (new_df2.xlsx) to adjust any wrong parsing content and reprodce json files if necessary
  7. Rename *.json into data.json based on different plugin and move it to upper folder

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