add score_genes support for Dask #408
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flying-sheep
approved these changes
Jul 22, 2025
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| if isinstance(X._meta, csc_matrix_cpu): | ||
| pass | ||
| meta = _meta_sparse if isinstance(X._meta, csr_matrix_cpu) else _meta_dense | ||
| X = X.map_blocks(X_to_GPU, meta=meta(X.dtype)) | ||
| elif isinstance(X._meta, csr_matrix_gpu) or isinstance(X._meta, cp.ndarray): | ||
| pass |
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Suggested change
| if isinstance(X._meta, csc_matrix_cpu): | |
| pass | |
| meta = _meta_sparse if isinstance(X._meta, csr_matrix_cpu) else _meta_dense | |
| X = X.map_blocks(X_to_GPU, meta=meta(X.dtype)) | |
| elif isinstance(X._meta, csr_matrix_gpu) or isinstance(X._meta, cp.ndarray): | |
| pass | |
| if isinstance(X._meta, csc_matrix_cpu | csr_matrix_gpu | cp.ndarray): | |
| pass |
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| return cp.vstack([mean, var]) | ||
| return cp.stack([mean, var], axis=1) |
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I’m curious: why the axis switch? is this more local?
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this works the other for some reason doesn't
|
I have csc support for non dask arrays. But for the moment I don't support dask csc in general also because of cupy being weird about it. |
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