fix: correct admonition formatting and add missing bot permissions in docs

CHANGELOG.md

@@ -7,9 +7,24 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ## [Unreleased]
 
+## [0.5.0] - 2026-02-18
+
 ### Added
 
-- **Seqera Platform Deep Links**: Automatically adds a "View in Seqera Platform" button to all Slack notifications when running through Seqera Platform ([#36](https://github.com/seqeralabs/nf-slack/issues/36))
+- **Seqera Platform Deep Links**: Automatically adds a "View in Seqera Platform" button to all Slack notifications when running through Seqera Platform. Reads `watchUrl` from TowerClient, auto-detected and configurable via `slack.seqeraPlatform.enabled`. Start message updated asynchronously once URL is available ([#43](https://github.com/seqeralabs/nf-slack/pull/43))
+- **Progress Updates**: Real-time progress during pipeline execution via in-place start message updates using `chat.update`. Event-driven with rate limiting. Configure via `slack.onProgress { enabled = true; interval = '5m' }`. Tracks submitted, completed, cached, and failed tasks ([#44](https://github.com/seqeralabs/nf-slack/pull/44))
+- **Emoji Reactions**: Automatic emoji reactions on start message for workflow status (🚀 start, ✅ success, ❌ error). Configure via `slack.reactions { enabled = true }`. Requires bot token, fire-and-forget ([#41](https://github.com/seqeralabs/nf-slack/pull/41))
+- **Connection Validation**: Validates Slack credentials on startup using `auth.test` and `conversations.info`. Enabled by default via `slack.validateOnStartup = true`. Warns on failure, never blocks pipeline execution ([#40](https://github.com/seqeralabs/nf-slack/pull/40))
+
+### Fixed
+
+- **Cancelled Workflow Notifications**: Cancelled workflows (via Seqera Platform) now correctly send error notifications instead of success. Checks `session.workflowMetadata.success` in `onFlowComplete()` ([#50](https://github.com/seqeralabs/nf-slack/pull/50))
+- **`includeFields` Config Bug**: Config-level `onStart/onComplete/onError.includeFields` was silently ignored by default message builders. Added `includeFields` property to config classes and `shouldIncludeField()` helper ([#48](https://github.com/seqeralabs/nf-slack/pull/48))
+- **Spurious Reaction Warning**: Fixed "Failed to remove reaction" warning when `onStart.enabled = false` by tracking `startReactionAdded` flag. Downgraded `no_reaction` from WARN to DEBUG ([#48](https://github.com/seqeralabs/nf-slack/pull/48))
+
+### Changed
+
+- **Documentation Simplification**: Consolidated from 11 pages to 6 (~2300 to ~1300 lines). Standardized examples to bot tokens. Removed 7 obsolete configs and 8 unreferenced screenshots. Fixed broken links ([#48](https://github.com/seqeralabs/nf-slack/pull/48))
 
 ## [0.4.0] - 2026-02-11
 
@@ -220,19 +235,11 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 - **CI/CD**: Updated Claude Code review workflow for improved PR automation ([#20](https://github.com/seqeralabs/nf-slack/pull/20), [#19](https://github.com/seqeralabs/nf-slack/pull/19))
 
-## [Unreleased]
-
-### Planned
-
-- Asynchronous message sending with ExecutorService
-- Retry logic with exponential backoff (429, 5xx errors)
-- Rate limiting (1 message/second with burst capacity)
-- Webhook URL validation (HTTPS enforcement, format checking)
-
 ---
 
 ## Version History
 
+- **[0.5.0]** - Seqera Platform deep links, progress updates, emoji reactions, connection validation, bug fixes
 - **[0.4.0]** - File upload support, config-based uploads, remote file support
 - **[0.3.1]** - Documentation updates for bot support and threading features
 - **[0.3.0]** - Slack Bot integration, message threading, and organization migration
@@ -241,6 +248,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 - **[0.1.1]** - Release automation and documentation improvements
 - **[0.1.0]** - Initial release with automatic notifications, custom messages, and progressive configuration examples
 
+[0.5.0]: https://github.com/seqeralabs/nf-slack/releases/tag/v0.5.0
 [0.4.0]: https://github.com/seqeralabs/nf-slack/releases/tag/v0.4.0
 [0.3.1]: https://github.com/seqeralabs/nf-slack/releases/tag/v0.3.1
 [0.3.0]: https://github.com/seqeralabs/nf-slack/releases/tag/v0.3.0

README.md

@@ -20,7 +20,7 @@ Add to your `nextflow.config`:
 
 ```groovy
 plugins {
-    id 'nf-slack@0.4.0'
+    id 'nf-slack@0.5.0'
 }
 
 slack {

build.gradle

@@ -2,7 +2,7 @@ plugins {
     id 'io.nextflow.nextflow-plugin' version '1.0.0-beta.12'
 }
 
-version = '0.4.1'
+version = '0.5.0'
 
 nextflowPlugin {
     nextflowVersion = '24.10.0'

docs/CONTRIBUTING.md

@@ -41,7 +41,7 @@ Thank you for your interest in contributing to nf-slack! This document provides
 5. **Test with Nextflow**
 
    ```bash
-   nextflow run hello -plugins nf-slack@0.4.0 // Make sure to have the correct version!
+   nextflow run hello -plugins nf-slack@0.5.0 // Make sure to have the correct version!
    ```
 
 ## Development Workflow

docs/examples/gallery.md

@@ -2,15 +2,16 @@
 
 Complete, runnable examples that demonstrate nf-slack features. Each example can be run directly from the `example/` directory.
 
+<!-- prettier-ignore -->
 !!! tip "Running Examples"
-All config examples can be run with:
-`bash
+    All config examples can be run with:
+    ```bash
     nextflow run main.nf -c configs/<example>.config
-    `
-Script examples run directly:
-`bash
+    ```
+    Script examples run directly:
+    ```bash
     nextflow run scripts/<example>.nf -c configs/01-minimal.config
-    `
+    ```
 
 ---
 

docs/getting-started/setup.md

@@ -25,6 +25,8 @@ nf-slack supports two authentication methods. **Bot User is recommended** — it
     2. Under **"Bot Token Scopes"**, add:
         - `chat:write` — Send messages
         - `chat:write.public` — Post to channels without joining *(optional)*
+        - `reactions:write` — Add emoji reactions *(optional — required for [emoji reactions](../usage/guide.md#emoji-reactions))*
+        - `files:write` — Upload files *(optional — required for [file uploads](../usage/guide.md#file-uploads))*
 
     **Install and copy token:**
 
@@ -98,7 +100,7 @@ Add nf-slack to your `nextflow.config`:
 
 ```groovy
 plugins {
-    id 'nf-slack@0.4.0'
+    id 'nf-slack@0.5.0'
 }
 ```
 

docs/index.md

@@ -17,7 +17,7 @@ Slack notifications for your Nextflow workflows. Get notified when pipelines sta
 
 ```groovy
 plugins {
-    id 'nf-slack@0.4.0'
+    id 'nf-slack@0.5.0'
 }
 
 slack {
@@ -31,8 +31,9 @@ slack {
 
 **2. Run your pipeline** — that's it! You'll get Slack notifications automatically.
 
+<!-- prettier-ignore -->
 !!! tip "Need help setting up Slack?"
-See the **[Setup Guide](getting-started/setup.md)** for step-by-step instructions on creating a Slack app and choosing between Bot and Webhook modes.
+    See the **[Setup Guide](getting-started/setup.md)** for step-by-step instructions on creating a Slack app and choosing between Bot and Webhook modes.
 
 ## What Can You Do?
 

docs/reference/api.md

@@ -128,7 +128,9 @@ Configuration for workflow completion notifications.
 | `showFooter`           | Boolean        | `true`                                   | Show timestamp footer in message                              |
 | `files`                | `List<String>` | `[]`                                     | File paths to upload after completion notification (Bot only) |
 
-> [!NOTE] > `includeResourceUsage` is **only available** in the `onComplete` scope.
+<!-- prettier-ignore -->
+!!! note
+    `includeResourceUsage` is **only available** in the `onComplete` scope.
 
 #### Message Available Fields
 

docs/usage/guide.md

@@ -149,8 +149,9 @@ slack {
 
 ## Threading
 
+<!-- prettier-ignore -->
 !!! note "Bot User only"
-Threading requires a Bot User. Webhooks do not support this feature.
+    Threading requires a Bot User. Webhooks do not support this feature.
 
 Group all notifications from a single pipeline run into one Slack thread:
 
@@ -168,8 +169,9 @@ The start notification becomes the parent message. Complete, error, and any cust
 
 ## Emoji Reactions
 
+<!-- prettier-ignore -->
 !!! note "Bot User only"
-Emoji reactions require a Bot User. Webhooks do not support this feature.
+    Emoji reactions require a Bot User. Webhooks do not support this feature.
 
 Add emoji reactions to the start notification to show pipeline status at a glance:
 
@@ -190,8 +192,9 @@ slack {
 
 ## Progress Updates
 
+<!-- prettier-ignore -->
 !!! note "Bot User only"
-Progress updates require a Bot User with threading enabled.
+    Progress updates require a Bot User with threading enabled.
 
 Get periodic progress updates during long-running pipelines:
 
@@ -213,8 +216,9 @@ Progress messages are posted as replies in the pipeline's thread.
 
 ## File Uploads
 
+<!-- prettier-ignore -->
 !!! note "Bot User only"
-File uploads require a Bot User.
+    File uploads require a Bot User.
 
 Attach files (logs, reports, plots) to completion or error notifications:
 

example/configs/01-minimal.config

@@ -1,5 +1,5 @@
 plugins {
-    id 'nf-slack@0.4.1'
+    id 'nf-slack@0.5.0'
 }
 
 slack {

example/configs/02-notification-control.config

@@ -1,5 +1,5 @@
 plugins {
-    id 'nf-slack@0.4.1'
+    id 'nf-slack@0.5.0'
 }
 
 slack {

example/configs/03-message-text.config

@@ -1,5 +1,5 @@
 plugins {
-    id 'nf-slack@0.4.1'
+    id 'nf-slack@0.5.0'
 }
 
 slack {

example/configs/04-custom-fields.config

@@ -1,5 +1,5 @@
 plugins {
-    id 'nf-slack@0.4.1'
+    id 'nf-slack@0.5.0'
 }
 
 slack {

example/configs/05-selective-fields.config

@@ -1,5 +1,5 @@
 plugins {
-    id 'nf-slack@0.4.1'
+    id 'nf-slack@0.5.0'
 }
 
 slack {

example/configs/06-threaded-messages.config

@@ -1,5 +1,5 @@
 plugins {
-    id 'nf-slack@0.4.0'
+    id 'nf-slack@0.5.0'
 }
 
 slack {

example/configs/07-file-upload.config

@@ -1,5 +1,5 @@
 plugins {
-    id 'nf-slack@0.4.1'
+    id 'nf-slack@0.5.0'
 }
 
 slack {

example/nextflow.config

@@ -3,7 +3,7 @@
  */
 
 plugins {
-    id 'nf-slack@0.4.0'
+    id 'nf-slack@0.5.0'
 }
 
 // Slack configuration