Rn d by hayekr · Pull Request #330 · sequence-toolbox/SeQUeNCe

hayekr · 2026-04-10T19:31:25Z

No description provided.

…; reorganized the swapping module by using the registry decorator

Bumps [urllib3](https://github.com/urllib3/urllib3) from 2.6.1 to 2.6.3. - [Release notes](https://github.com/urllib3/urllib3/releases) - [Changelog](https://github.com/urllib3/urllib3/blob/main/CHANGES.rst) - [Commits](urllib3/urllib3@2.6.1...2.6.3) --- updated-dependencies: - dependency-name: urllib3 dependency-version: 2.6.3 dependency-type: indirect ... Signed-off-by: dependabot[bot] <support@github.com>

Bumps [pillow](https://github.com/python-pillow/Pillow) from 12.0.0 to 12.1.1. - [Release notes](https://github.com/python-pillow/Pillow/releases) - [Changelog](https://github.com/python-pillow/Pillow/blob/main/CHANGES.rst) - [Commits](python-pillow/Pillow@12.0.0...12.1.1) --- updated-dependencies: - dependency-name: pillow dependency-version: 12.1.1 dependency-type: indirect ... Signed-off-by: dependabot[bot] <support@github.com>

….1.1 Bump pillow from 12.0.0 to 12.1.1

….6.3 Bump urllib3 from 2.6.1 to 2.6.3

Bumps [nbconvert](https://github.com/jupyter/nbconvert) from 7.16.6 to 7.17.0. - [Release notes](https://github.com/jupyter/nbconvert/releases) - [Changelog](https://github.com/jupyter/nbconvert/blob/main/CHANGELOG.md) - [Commits](jupyter/nbconvert@v7.16.6...v7.17.0) --- updated-dependencies: - dependency-name: nbconvert dependency-version: 7.17.0 dependency-type: indirect ... Signed-off-by: dependabot[bot] <support@github.com>

…-7.17.0

Entanglement Swapping BDS Implementation

Bumps [flask](https://github.com/pallets/flask) from 3.1.2 to 3.1.3. - [Release notes](https://github.com/pallets/flask/releases) - [Changelog](https://github.com/pallets/flask/blob/main/CHANGES.rst) - [Commits](pallets/flask@3.1.2...3.1.3) --- updated-dependencies: - dependency-name: flask dependency-version: 3.1.3 dependency-type: indirect ... Signed-off-by: dependabot[bot] <support@github.com>

Bumps [werkzeug](https://github.com/pallets/werkzeug) from 3.1.4 to 3.1.6. - [Release notes](https://github.com/pallets/werkzeug/releases) - [Changelog](https://github.com/pallets/werkzeug/blob/main/CHANGES.rst) - [Commits](pallets/werkzeug@3.1.4...3.1.6) --- updated-dependencies: - dependency-name: werkzeug dependency-version: 3.1.6 dependency-type: indirect ... Signed-off-by: dependabot[bot] <support@github.com>

…3.1.6

…ailable

Keep draw_topo.py

…oolbox/SeQUeNCe into resource-manager-early-expire

… saying refer to chapter 6 Application module for standard usage

…n parents.

Make init call more general in QuantumRouter

…e-manager Update the tutorial

… StaticRoutingProtocol and DistributedRoutingProtocol. The register decorator is used to make it easy to plug in new routing protocols in the future.

…est.

…expire Resource Manager Early Expire

Routing Module using Register

- Remove 3.11 from CI matrix and pyproject.toml classifiers - Update requires-python to >=3.12 - Update README minimum version - Modernize typing: Optional→X|None, List→list, Dict→dict, Tuple→tuple, Type→type (PEP 585/604)

Deprecate Python 3.11 (#287)

Copilot

Pull request overview

This PR bumps SeQUeNCe to v1.0.0, updates the supported Python baseline to 3.12+, and introduces major internal refactors around routing (new RoutingProtocol base + registry/factory) and entanglement swapping (new swapping package with formalism-specific implementations). It also migrates/cleans up various utility scripts and updates tests/docs to match the new APIs.

Changes:

Introduce sequence.network_management.routing package with a RoutingProtocol base class and registry-driven protocol selection; update topology and tests to use routing_static / routing_distributed.
Replace legacy sequence/entanglement_management/swapping.py with a new sequence/entanglement_management/swapping/ package and factory-based swapping protocol creation.
Bump project version to 1.0.0, require Python >=3.12, update dependencies/lockfile, and add CLI entry points for config generators.

Reviewed changes

Copilot reviewed 81 out of 82 changed files in this pull request and generated 3 comments.

Show a summary per file

File	Description
uv.lock	Updates lock revision and multiple dependency versions; adds `graphviz`.
utils/timing_test.py	Removes local timing helper script.
utils/qmanager_timing.py	Removes qmanager timing script.
utils/lock_test.py	Removes lock test script.
utils/json_config_generators/config_generator_star.py	Removes legacy star config generator from `utils/`.
utils/json_config_generators/config_generator_ring.py	Removes legacy ring config generator from `utils/`.
utils/json_config_generators/config_generator_mesh.py	Removes legacy mesh config generator from `utils/`.
utils/json_config_generators/config_generator_line.py	Removes legacy line config generator from `utils/`.
utils/json_config_generators/config_generator_caveman.py	Removes legacy caveman config generator from `utils/`.
utils/json_config_generators/config_generator_as_memo_num.py	Removes legacy AS/memo-number config generator from `utils/`.
utils/dict_timing.py	Removes dict timing script.
utils/cavity_vs_fidelity.py	Removes fidelity helper script.
tests/topology/test_dqc_node_net_topo.py	Minor cleanup of trailing whitespace.
tests/topology/dqc_node_net_topo_simple.json	Updates routing template identifier to `routing_static`.
tests/network_management/test_routing.py	Updates distributed routing import/module naming.
tests/network_management/test_reservation.py	Updates `Reservation.__str__` expectation.
tests/network_management/test_network_manager.py	Updates forwarding rule API usage.
tests/network_management/ring_topo.json	Updates routing template identifier to `routing_distributed`.
tests/network_management/line_topo.json	Updates routing template identifier to `routing_distributed`.
tests/entanglement_management/test_swapping.py	Switches swapping protocol instantiation to factory `.create()`.
sequence/utils/noise.py	Updates typing annotations (builtin generics).
sequence/utils/draw_topo.py	Minor comment capitalization.
sequence/utils/config_generator.py	Converts imports to package-relative form.
sequence/utils/config_generator_tree.py	Refactors into `main()` entry point and updates imports/signatures.
sequence/utils/config_generator_star.py	Adds packaged star config generator with `main()`.
sequence/utils/config_generator_ring.py	Adds packaged ring config generator with `main()`.
sequence/utils/config_generator_random.py	Updates imports to package-relative form.
sequence/utils/config_generator_mesh.py	Adds packaged mesh config generator with `main()`.
sequence/utils/config_generator_line.py	Adds packaged line config generator with `main()`.
sequence/utils/config_generator_caveman.py	Adds packaged caveman config generator with `main()`.
sequence/utils/config_generator_as_memo_num.py	Adds packaged AS/memo-number config generator with `main()`.
sequence/topology/topology.py	Removes unused typing import(s).
sequence/topology/router_net_topo.py	Uses new routing module API and updates ket formalism constant usage.
sequence/topology/node.py	Adds manager initialization via `resource_manager.init()` / `network_manager.init()`.
sequence/topology/dqc_net_topo.py	Updates forwarding rule API usage.
sequence/resource_management/rule_manager.py	Updates typing and minor formatting cleanup.
sequence/resource_management/resource_manager.py	Adds `EARLY_EXPIRE` message flow + refactors message dispatch with `match`.
sequence/resource_management/action_condition_set.py	Updates swapping instantiation to `.create()` and docstring cleanup.
sequence/protocol.py	Adds `protocol_type` initialization and default `init()`.
sequence/network_management/rsvp.py	Reorders imports and improves typing with `__future__` annotations.
sequence/network_management/routing/routing_static.py	Adds new `StaticRoutingProtocol` under routing package.
sequence/network_management/routing/routing_distributed.py	Migrates distributed routing into routing package and base class usage.
sequence/network_management/routing/routing_base.py	Adds new routing protocol base + registry/factory utilities.
sequence/network_management/routing/init.py	Exposes routing protocol APIs and implementations.
sequence/network_management/routing_static.py	Removes legacy static routing module (superseded by routing package).
sequence/network_management/reservation.py	Updates `Reservation` docs/formatting and equality/hash semantics.
sequence/network_management/network_manager.py	Switches routing selection to `RoutingProtocol.create()` and adds `init()`.
sequence/network_management/init.py	Updates exported module surface.
sequence/kernel/quantum_state.py	Refactors numpy usage and removes wildcard imports.
sequence/kernel/quantum_manager.py	Renames ket formalism constant to `KET_VECTOR_FORMALISM`.
sequence/gui/simulator_bindings.py	Updates forwarding rule API usage.
sequence/entanglement_management/swapping/swapping_circuit.py	Adds circuit-based swapping implementation(s).
sequence/entanglement_management/swapping/swapping_bds.py	Adds BDS swapping implementation(s).
sequence/entanglement_management/swapping/swapping_base.py	Adds swapping base classes + registry/factory pattern.
sequence/entanglement_management/swapping/init.py	Exposes swapping public API from new package.
sequence/entanglement_management/swapping.py	Removes legacy swapping module (replaced by package).
sequence/entanglement_management/purification/bbpssw_protocol.py	Updates ket constant name and protocol base init usage.
sequence/entanglement_management/purification/bbpssw_circuit.py	Updates ket constant name.
sequence/entanglement_management/purification/bbpssw_bds.py	Cleans typing/docstrings.
sequence/entanglement_management/generation/single_heralded.py	Typing cleanup.
sequence/entanglement_management/generation/generation_message.py	Removes unused typing import.
sequence/entanglement_management/generation/generation_base.py	Uses new `protocol_type` initializer.
sequence/entanglement_management/entanglement_protocol.py	Threads `protocol_type` through base init.
sequence/entanglement_management/init.py	Updates exported module surface.
sequence/constants.py	Renames `KET_STATE_FORMALISM` to `KET_VECTOR_FORMALISM`.
sequence/components/memory.py	Ensures BDS fidelity is returned as `float`.
sequence/components/circuit.py	Removes unused typing import.
sequence/components/bsm.py	Updates ket constant name.
sequence/app/request_app.py	Improves reservation result logging messages.
README.md	Updates stated minimum Python version to 3.12+.
pyproject.toml	Bumps version to 1.0.0, sets Python >=3.12, adds `graphviz`, adds CLI scripts.
example/demo_for_beginners/three_node_eg_ep_es.ipynb	Updates forwarding rule API usage.
docs/source/tutorial/chapter6/custom_app.py	Typing/import cleanup with `__future__` annotations.
docs/source/tutorial/chapter5/network_manager.md	Adds note about preferred `app` usage and clarifies scope.
docs/source/tutorial/chapter4/two_flow.py	Updates swapping instantiation to `.create()` and formatting.
docs/source/tutorial/chapter4/resource_management.md	Updates examples to new APIs and adds guidance notes.
docs/source/tutorial/chapter3/example3.py	Updates swapping instantiation to `.create()`.
docs/source/tutorial/chapter3/entangle.md	Updates swapping instantiation to `.create()` and adds guidance note.
docs/source/tutorial/chapter1/discrete-event-simulation.md	Updates list typing in comment/example.
docs/source/tutorial/chapter0/prerequisite.md	Updates stated minimum Python version (doc).
CHANGELOG.md	Adds 1.0.0 release notes and updates routing module reference.
.github/workflows/validation.yml	Drops Python 3.11 from CI matrix.

💡 Add Copilot custom instructions for smarter, more guided reviews. Learn how to get started.

Copilot · 2026-04-10T19:35:55Z

+def main():
+# example: python config_generator_as_memo_num.py 20 0 1 10 1 0.0002 1 -o as_20.json -s 10
+
+    parser = argparse.ArgumentParser()
+    parser.add_argument('net_size', type=int, help="net_size (int) - Number of routers")


main() has no indented body because the example comment is at column 0. As written, this will raise an IndentationError at import time. Indent the comment (or add a docstring) so the first statement in main() is properly indented under the function definition.

Copilot · 2026-04-10T19:35:55Z

 ]

+[project.scripts]
+generate-internet-autonomous = "utils.config_generators.config_generator_as_memo_num:main"


generate-internet-autonomous points to utils.config_generators.config_generator_as_memo_num:main, but there is no utils/ package in the repo and the generator was moved under sequence.utils.config_generator_as_memo_num. This entry point will fail at runtime with ModuleNotFoundError. Update the script target to the correct import path.

Suggested change

generate-internet-autonomous = "utils.config_generators.config_generator_as_memo_num:main"

generate-internet-autonomous = "sequence.utils.config_generator_as_memo_num:main"

Copilot · 2026-04-10T19:35:56Z

 ### Python Version

-The simulator requires at least version **3.10** of Python. This can be found at the [Python Website](https://www.python.org/downloads/).
+The simulator requires at least version **3.11** of Python. This can be found at the [Python Website](https://www.python.org/downloads/).


This doc now states a minimum Python version of 3.11, but the project metadata requires Python >=3.12 (see pyproject.toml). Update the prerequisite to match the supported versions to avoid confusing users.

Suggested change

The simulator requires at least version **3.11** of Python. This can be found at the [Python Website](https://www.python.org/downloads/).

The simulator requires at least version **3.12** of Python. This can be found at the [Python Website](https://www.python.org/downloads/).

hayekr and others added 30 commits March 2, 2026 20:51

Move everything in the module to ease imports

107172d

Add entry points for cli to each. Create project script for each

4071681

Fix imports to relative.

e5eedd1

Fix args

da15315

Update changelog and version

b71a1c9

Fix typo, preserve backward compat

ce7b4fe

fix random.choice to use correct method

5daa8cf

Update the lock file

6d0825d

Fix imports

314a13a

[major] added the BDS formalism of the entanglement swapping protocol…

7dd6d5e

…; reorganized the swapping module by using the registry decorator

[minor] updating docstrings and minor refactor

207848e

Merge pull request #317 from sequence-toolbox/dependabot/uv/pillow-12…

e70a54b

….1.1 Bump pillow from 12.0.0 to 12.1.1

Merge pull request #316 from sequence-toolbox/dependabot/uv/urllib3-2…

8676434

….6.3 Bump urllib3 from 2.6.1 to 2.6.3

[minor] update docstring and README; remove the quotaiton markin typing

53cbdcd

Merge pull request #318 from sequence-toolbox/dependabot/uv/nbconvert…

a8512dc

…-7.17.0

Merge pull request #315 from sequence-toolbox/310-swapping-bds

9850fe8

Entanglement Swapping BDS Implementation

Merge pull request #319 from sequence-toolbox/dependabot/uv/flask-3.1.3

9d795b8

Merge pull request #320 from sequence-toolbox/dependabot/uv/werkzeug-…

de6d7b5

…3.1.6

Bump version

0d8180d

Merge branch 'RnD' into 311-make-the-json-config-generators-script-av…

568c629

…ailable

Update the lock

462edd0

[minor] cosmetic updates

1a7c1c7

[minor] add a new message type EARLY_EXPIRE for resource manager

e82b40c

Delete util/. Move config to sequence/utils/

d9dbbd5

Keep draw_topo.py

Switch to np import

9455606

caitaozhan and others added 23 commits March 10, 2026 15:16

Merge branch 'resource-manager-early-expire' of github.com:sequence-t…

9508ee9

…oolbox/SeQUeNCe into resource-manager-early-expire

[minor] use np. prefix

7bc3191

[minor] update the tutorial to catch up the recent updates; add NOTEs…

0d197d4

… saying refer to chapter 6 Application module for standard usage

[minor] fix comments

906ab78

[minor]

4584239

[minor] resolve comments

309a59c

Add passing init to nw manager and rs manager. Create missing inits i…

d975066

…n parents.

Changelog

3ebcc19

Merge pull request #324 from sequence-toolbox/fix_manager_init

9b3f04d

Make init call more general in QuantumRouter

Merge pull request #323 from sequence-toolbox/update-tutorial-resourc…

8118647

…e-manager Update the tutorial

[minor] Docstring, comment, logging, and various cosmetic updates

23c9fab

[major] Create a parent class RoutingProtocol for the current classes…

35a6cda

… StaticRoutingProtocol and DistributedRoutingProtocol. The register decorator is used to make it easy to plug in new routing protocols in the future.

[minor] update CHANGELOG

dbce95f

[minor] cosmetic updates

e00b385

[minor] resolve comments

9e683bf

[minor] resolve comments

0296107

Merge branch 'RnD' into resource-manager-early-expire

f74bbe6

Fix __str__ format in Reservation class and update related unit t…

3cb617e

…est.

Merge pull request #322 from sequence-toolbox/resource-manager-early-…

f7d21f9

…expire Resource Manager Early Expire

[minor] deleted the global_type for RoutingProtocol

b51866a

Merge pull request #326 from sequence-toolbox/routing-module-register

b7ee20b

Routing Module using Register

Deprecate Python 3.11 (#287)

7840817

- Remove 3.11 from CI matrix and pyproject.toml classifiers - Update requires-python to >=3.12 - Update README minimum version - Modernize typing: Optional→X|None, List→list, Dict→dict, Tuple→tuple, Type→type (PEP 585/604)

Merge pull request #328 from formeo/287-deprecate-python-311

718b324

Deprecate Python 3.11 (#287)

Copilot AI review requested due to automatic review settings April 10, 2026 19:31

hayekr requested review from Alex-Kolar, JoaquinChung and caitaozhan as code owners April 10, 2026 19:31

hayekr closed this Apr 10, 2026

Copilot started reviewing on behalf of hayekr April 10, 2026 19:32 View session

Copilot AI reviewed Apr 10, 2026

View reviewed changes

Provide feedback

Saved searches

Use saved searches to filter your results more quickly

Uh oh!

Rn d#330

Rn d#330
hayekr wants to merge 55 commits into
masterfrom
RnD

hayekr commented Apr 10, 2026

Uh oh!

Copilot AI left a comment

Uh oh!

Copilot AI Apr 10, 2026

Uh oh!

Copilot AI Apr 10, 2026

Uh oh!

Copilot AI Apr 10, 2026

Uh oh!

Reviewers

Assignees

Labels

Projects

Milestone

Development

Uh oh!

3 participants

	generate-internet-autonomous = "utils.config_generators.config_generator_as_memo_num:main"
	generate-internet-autonomous = "sequence.utils.config_generator_as_memo_num:main"

	The simulator requires at least version 3.11 of Python. This can be found at the [Python Website](https://www.python.org/downloads/).
	The simulator requires at least version 3.12 of Python. This can be found at the [Python Website](https://www.python.org/downloads/).

Uh oh!

Conversation

hayekr commented Apr 10, 2026

Uh oh!

Copilot AI left a comment

Choose a reason for hiding this comment

Pull request overview

Reviewed changes

Uh oh!

Copilot AI Apr 10, 2026

Choose a reason for hiding this comment

Uh oh!

Copilot AI Apr 10, 2026

Choose a reason for hiding this comment

Uh oh!

Copilot AI Apr 10, 2026

Choose a reason for hiding this comment

Uh oh!

Reviewers

Assignees

Labels

Projects

Milestone

Development

Uh oh!

3 participants