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- Status: Open.#95 In sheynkman-lab/biosurfer;
Wiki for Biosurfer Project
documentationImprovements or additions to documentationImprovements or additions to documentationStatus: Open.#94 In sheynkman-lab/biosurfer;Behavior of linking Nucleotides to Residues is possibly counterintuitive
designhigh-level design ideas, brainstorminghigh-level design ideas, brainstormingStatus: Open.#92 In sheynkman-lab/biosurfer;Abstract data structure to handle relationships among parent and children
designhigh-level design ideas, brainstorminghigh-level design ideas, brainstormingpostponedThis should be handled in the future, but is low priority right nowThis should be handled in the future, but is low priority right nowStatus: Open.#91 In sheynkman-lab/biosurfer;How to better organize different data sources
designhigh-level design ideas, brainstorminghigh-level design ideas, brainstormingenhancementNew feature or requestNew feature or requestpostponedThis should be handled in the future, but is low priority right nowThis should be handled in the future, but is low priority right nowStatus: Open.#90 In sheynkman-lab/biosurfer;Reference database initialization
designhigh-level design ideas, brainstorminghigh-level design ideas, brainstormingenhancementNew feature or requestNew feature or requestpostponedThis should be handled in the future, but is low priority right nowThis should be handled in the future, but is low priority right nowStatus: Open.#89 In sheynkman-lab/biosurfer;Refactoring/optimization of IsoformPlot
designhigh-level design ideas, brainstorminghigh-level design ideas, brainstormingplottingRelated to plotting and visualizationRelated to plotting and visualizationpostponedThis should be handled in the future, but is low priority right nowThis should be handled in the future, but is low priority right nowStatus: Open.#88 In sheynkman-lab/biosurfer;Refactor Exon to map against an association table between the transcript and exon tables
designhigh-level design ideas, brainstorminghigh-level design ideas, brainstormingpostponedThis should be handled in the future, but is low priority right nowThis should be handled in the future, but is low priority right nowStatus: Open.#85 In sheynkman-lab/biosurfer;ProteinAlignmentBlock should account for AA sequence matches
enhancementNew feature or requestNew feature or requestpriorityhigh priority (should be addressed within the week)high priority (should be addressed within the week)Status: Open.#84 In sheynkman-lab/biosurfer;sQTL representations in biosurfer
designhigh-level design ideas, brainstorminghigh-level design ideas, brainstormingStatus: Open.#73 In sheynkman-lab/biosurfer;Associate expression data with Transcript/Junction/Exon objects
designhigh-level design ideas, brainstorminghigh-level design ideas, brainstormingenhancementNew feature or requestNew feature or requestStatus: Open.#72 In sheynkman-lab/biosurfer;Detect experimentally sequenced transcripts that are subsets of other transcripts
enhancementNew feature or requestNew feature or requestStatus: Open.#59 In sheynkman-lab/biosurfer;