[Bug] MAFFT version output has stray parenthesis

[smagala]

Description

MAFFT_ALIGN version output shows: mafft 7.525 with pigz 2.8) - there's a stray ) character.

Expected

Clean version output without trailing punctuation.

Investigation

• Check MAFFT module versions.yml generation
• Likely a sed/regex issue in version parsing

LoE Estimate

10 minutes

[smagala]

Fixed

Root Cause

Extra closing parenthesis in MAFFT module versions.yml generation:

pigz: \$(echo \$(pigz --version 2>&1) | sed 's/^.*pigz\\w*//' ))  # Double )

Fix Applied

Removed the extra ) in modules/nf-core/mafft/align/main.nf

Verification

Run #65 shows clean version output:

MAFFT_ALIGN:
  mafft: 7.525
  pigz: 2.8

Time

• Estimated: 10 min
• Actual: ~5 min