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nf-core linting comment nf-core linting comment #16: completed by smagala
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Pre-index BWA and samtools references for runtime optimization Fix linting from a comment #31: Issue comment #68 (comment) created by smagala
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nf-core linting comment nf-core linting comment #15: in_progress by smagala
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nf-core linting comment nf-core linting comment #14: requested by smagala
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[Feature] Pre-built BWA and samtools index support nf-core template version comment #5: Pull request #69 opened by smagala
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[Feature] Pre-built BWA and samtools index support nf-core linting #21: Pull request #69 opened by smagala
1m 41s feature-68-preindex-references
feature-68-preindex-references
1m 41s
[Enhancement] Update MultiQC report branding and content Fix linting from a comment #30: Issue comment #67 (comment) created by smagala
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[Bug] FALCO data missing from MultiQC report Fix linting from a comment #29: Issue comment #66 (comment) created by smagala
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[Bug] MAFFT version output has stray parenthesis Fix linting from a comment #28: Issue comment #65 (comment) created by smagala
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[Enhancement] Route QC data from pipeline tools to MultiQC Fix linting from a comment #27: Issue comment #63 (comment) created by smagala
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[Enhancement] Add Nextclade CSV output for MultiQC Fix linting from a comment #26: Issue comment #64 (comment) created by smagala
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[Enhancement] Route QC data from pipeline tools to MultiQC Fix linting from a comment #25: Issue comment #63 (comment) created by smagala
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[Run 60] Validate filename collision fix Fix linting from a comment #24: Issue comment #62 (comment) created by smagala
Skipped
Skipped
[Bug] Output filename collision in SUMMARIZE_RESULTS Fix linting from a comment #23: Issue comment #61 (comment) created by smagala
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[Run 59] Validation after channel cardinality fix Fix linting from a comment #22: Issue comment #59 (comment) created by smagala
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[Bug] Output filename collision in SUMMARIZE_RESULTS Fix linting from a comment #21: Issue comment #61 (comment) created by smagala
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[Bug] Channel cardinality bug - samples not crossed with all serotypes Fix linting from a comment #20: Issue comment #58 (comment) created by smagala
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[Run 56] Initial pipeline validation - PRJNA973096 full dataset Fix linting from a comment #19: Issue comment #56 (comment) created by smagala
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[Run 56] Initial pipeline validation - PRJNA973096 full dataset Fix linting from a comment #18: Issue comment #56 (comment) created by smagala
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[Run 56] Initial pipeline validation - PRJNA973096 full dataset Fix linting from a comment #17: Issue comment #56 (comment) created by smagala
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[Run 56] Initial pipeline validation - PRJNA973096 full dataset Fix linting from a comment #16: Issue comment #56 (comment) created by smagala
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Close user-tagged issues and PRs Close user-tagged issues and PRs #2: Scheduled
12s dev
dev
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Close user-tagged issues and PRs Close user-tagged issues and PRs #1: Scheduled
9s dev
dev
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[Epic 6] Documentation & Polish Fix linting from a comment #15: Issue comment #6 (comment) created by smagala
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nf-core linting comment nf-core linting comment #13: completed by smagala
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